library(INLA)
Loading required package: sp
package ‘sp’ was built under R version 3.4.1Loading required package: Matrix
This is INLA_17.06.20 built 2017-06-20 03:44:36 UTC.
See www.r-inla.org/contact-us for how to get help.
library(dplyr)
package ‘dplyr’ was built under R version 3.4.4
Attaching package: ‘dplyr’
The following objects are masked from ‘package:stats’:
filter, lag
The following objects are masked from ‘package:base’:
intersect, setdiff, setequal, union
library(readr)
library(stringi)
package ‘stringi’ was built under R version 3.4.4
library(rgdal)
package ‘rgdal’ was built under R version 3.4.4rgdal: version: 1.2-18, (SVN revision 718)
Geospatial Data Abstraction Library extensions to R successfully loaded
Loaded GDAL runtime: GDAL 2.1.3, released 2017/20/01
Path to GDAL shared files: /Library/Frameworks/R.framework/Versions/3.4/Resources/library/rgdal/gdal
GDAL binary built with GEOS: FALSE
Loaded PROJ.4 runtime: Rel. 4.9.3, 15 August 2016, [PJ_VERSION: 493]
Path to PROJ.4 shared files: /Library/Frameworks/R.framework/Versions/3.4/Resources/library/rgdal/proj
Linking to sp version: 1.2-7
library(spdep)
package ‘spdep’ was built under R version 3.4.4Loading required package: spData
package ‘spData’ was built under R version 3.4.4To access larger datasets in this package, install the spDataLarge package with:
`install.packages('spDataLarge', repos='https://nowosad.github.io/drat/',
type='source'))`
plot_fort_maps2 <- function(data, fill_str, legend_title, plot_title, size=0.1){
require(ggplot2)
require(ggsn)
require(broom)
ggplot() + # initialize ggplot object
geom_polygon( # make a polygon
data = data, # data frame
aes_string(x = "long", y = "lat", group = "group", # coordinates, and group them by polygons
fill = fill_str),
size=size, color="black") + # variable to use for filling
scale_fill_brewer(name=legend_title, palette = "RdYlBu", direction = -1,
drop = FALSE) + # fill with brewer colors # add title
theme(line = element_blank(),
axis.text=element_blank(), # .. tickmarks..
axis.title=element_blank(),
legend.position="none",
plot.margin = unit(c(0, 0, 0, 0), "cm"),
#legend.text=element_text(size=15),
#legend.title=element_text(size=17), # .. axis labels..
panel.background = element_blank(), plot.title = element_text(size=5)) + ggtitle(plot_title)
}
shape_to_ggplot <- function(shape){
require(broom)
gg_data <- tidy(shape)
data <- slot(shape, "data")
shape[["polyID"]] <- sapply(slot(shape, "polygons"), function(x) slot(x, "ID"))
gg_data <- merge(gg_data, shape, by.x="id", by.y="polyID")
return(gg_data)
}
SMR_data <- read_csv("~/Documents/Harvard - SM80/Thesis/Fortaleza_Hom_RGit_PRIVATE_Files/CT_SMR_per_mnth_MISSING_ADJ.csv",
col_types = cols(CD_GEOCODI = col_character()))
CT_shp <- readOGR("~/Documents/Harvard - SM80/Thesis/Fortaleza_Hom_RGit_PRIVATE_Files/Shapefiles/Shapefiles/CTs/", "Corrected_CTs", use_iconv = TRUE, encoding = "latin1")
OGR data source with driver: ESRI Shapefile
Source: "/Users/Sudipta/Documents/Harvard - SM80/Thesis/Fortaleza_Hom_RGit_PRIVATE_Files/Shapefiles/Shapefiles/CTs", layer: "Corrected_CTs"
with 3044 features
It has 13 fields
CT_shp_gg <- shape_to_ggplot(CT_shp)
Loading required package: broom
package ‘broom’ was built under R version 3.4.4Regions defined for each Polygons
Some CTs have homicides but non pop. We have to revisit these. For now, I am turning Inf IR and SMR to zero. At most there are 2 homicides per year in these CTs. Also NaN are pop zero, hom zero. Also turning these to zero.
SMR_data <- SMR_data %>%
mutate(Year=cut(Counter, breaks=seq(0,204,12), labels=c(2001:2017))) %>%
group_by(Year, CD_GEOCODI) %>%
summarize(y=sum(y), E=sum(E)) %>%
mutate(SMR=y/E) %>%
mutate(SMR=replace(SMR, SMR==Inf | is.nan(SMR), 0)) %>% as.data.frame() %>% rename(obs_count=y, exp_count=E) %>% na.omit()
package ‘bindrcpp’ was built under R version 3.4.4
CT_shp@data$CD_GEOCODI <- as.character(CT_shp@data$CD_GEOCODI)
CT_shp@data <- arrange(CT_shp@data, CD_GEOCODI)
CT_wm <- poly2nb(CT_shp, snap=0.001)
nb2INLA("CT_graph.adj", CT_wm)
CT_adj <- "CT_graph.adj"
Some CTs have homicides but non pop. We have to revisit these. For now, I am turning Inf IR and SMR to zero. At most there are 2 homicides per year in these CTs. Also NaN are pop zero, hom zero. Also turning these to zero. Also turning counts to zero if underlying population is zero
yearly_shp_data$Year <- rep(1:17, 3044)
SMR_data$Year <- as.integer(SMR_data$Year)
yearly_shp_data$CD_GECODI <- as.integer(yearly_shp_data$CD_GEOCODI)
BYM_data <- SMR_data %>% rename(y=obs_count, E=exp_count) %>% right_join(yearly_shp_data, by=c("CD_GEOCODI", "Year")) %>% mutate(y=replace(y, is.na(y), 0), E=replace(E, is.na(E), 0)) %>% dplyr::select(CD_GEOCODI, y, E, Year) %>% arrange(CD_GEOCODI) %>% mutate(bymID=unlist(lapply(1:3044, function(x) rep(x,17))))
Column `CD_GEOCODI` joining character vector and factor, coercing into character vector
BYM_data$fix_2016 <- ifelse(BYM_data$Year==16,1,0)
formula_yrlytrnd_2016fix <- y ~ 1 + f(bymID, model="bym",graph=CT_adj, constr=TRUE) + f(bymID2, year_int, model="iid", constr=TRUE) + year_int + f(bymID3, fix_2016, model="iid", constr=TRUE) + fix_2016
model_yrlytrnd_2016fix <- inla(formula_yrlytrnd_2016fix, family="poisson", data=BYM_data, E=E, verbose=TRUE, control.compute=list(dic=TRUE), control.predictor=list(compute=TRUE))
hgid: 29c6a7f1b1ff date: Thu Jun 15 19:50:23 2017 +0800
Report bugs to <help@r-inla.org>
Processing file [/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/Model.ini] max_threads=[4]
inla_build...
number of sections=[12]
parse section=[0] name=[INLA.libR] type=[LIBR]
inla_parse_libR...
section[INLA.libR]
R_HOME=[/Library/Frameworks/R.framework/Resources]
parse section=[11] name=[INLA.Expert] type=[EXPERT]
inla_parse_expert...
section[INLA.Expert]
disable.gaussian.check=[0]
cpo.manual=[0]
jp.Rfile=[(null)]
jp.RData=NULL
jp.func=[(null)]
parse section=[1] name=[INLA.Model] type=[PROBLEM]
inla_parse_problem...
name=[INLA.Model]
openmp.strategy=[default]
store results in directory=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/results.files]
output:
cpo=[0]
po=[0]
dic=[1]
kld=[1]
mlik=[1]
q=[0]
graph=[0]
gdensity=[0]
hyperparameters=[1]
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[3] name=[Predictor] type=[PREDICTOR]
inla_parse_predictor ...
section=[Predictor]
dir=[predictor]
PRIOR->name=[loggamma]
hyperid=[53001|Predictor]
PRIOR->from_theta=[function (x) <<NEWLINE>>exp(x)]
PRIOR->to_theta = [function (x) <<NEWLINE>>log(x)]
PRIOR->PARAMETERS=[1, 1e-05]
initialise log_precision[12]
fixed=[1]
user.scale=[1]
n=[51748]
m=[0]
ndata=[51748]
compute=[1]
read offsets from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960523b77f7] 19/51748 (idx,y) = (19, 0)
Aext=[(null)]
AextPrecision=[1e+08]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[2] name=[INLA.Data1] type=[DATA]
inla_parse_data [section 1]...
tag=[INLA.Data1]
family=[POISSON]
likelihood=[POISSON]
file->name=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19606aab95a6]
file->name=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196026edfc00]
read n=[155244] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19606aab95a6]
0/51748 (idx,a,y,d) = (0, 0.872178, 0, 1)
1/51748 (idx,a,y,d) = (1, 0.872178, 1, 1)
2/51748 (idx,a,y,d) = (2, 0.872178, 0, 1)
3/51748 (idx,a,y,d) = (3, 0.872178, 0, 1)
4/51748 (idx,a,y,d) = (4, 0.872178, 0, 1)
5/51748 (idx,a,y,d) = (5, 0.872178, 1, 1)
6/51748 (idx,a,y,d) = (6, 0.872178, 1, 1)
7/51748 (idx,a,y,d) = (7, 0.872178, 0, 1)
8/51748 (idx,a,y,d) = (8, 0.872178, 0, 1)
9/51748 (idx,a,y,d) = (9, 0.872178, 1, 1)
10/51748 (idx,a,y,d) = (10, 0.872178, 0, 1)
11/51748 (idx,a,y,d) = (11, 0.872178, 1, 1)
12/51748 (idx,a,y,d) = (12, 0.872178, 1, 1)
13/51748 (idx,a,y,d) = (13, 0.872178, 5, 1)
14/51748 (idx,a,y,d) = (14, 0.872178, 1, 1)
15/51748 (idx,a,y,d) = (15, 0.872178, 0, 1)
16/51748 (idx,a,y,d) = (16, 0.872178, 0, 1)
17/51748 (idx,a,y,d) = (17, 0.287131, 0, 1)
18/51748 (idx,a,y,d) = (18, 0.287131, 0, 1)
19/51748 (idx,a,y,d) = (19, 0.287131, 0, 1)
likelihood.variant=[0]
Link model [LOG]
Link order [-1]
Link variant [-1]
Link ntheta [0]
mix.use[0]
parse section=[7] name=[bymID] type=[FFIELD]
inla_parse_ffield...
section=[bymID]
dir=[random.effect00000001]
model=[bym]
PRIOR0->name=[loggamma]
hyperid=[10001|bymID]
PRIOR0->from_theta=[function (x) <<NEWLINE>>exp(x)]
PRIOR0->to_theta = [function (x) <<NEWLINE>>log(x)]
PRIOR0->PARAMETERS0=[1, 0.0005]
PRIOR1->name=[loggamma]
hyperid=[10002|bymID]
PRIOR1->from_theta=[function (x) <<NEWLINE>>exp(x)]
PRIOR1->to_theta = [function (x) <<NEWLINE>>log(x)]
PRIOR1->PARAMETERS1=[1, 0.0005]
correct=[-1]
constr=[0]
diagonal=[1.01511e-05]
id.names=<not present>
compute=[1]
nrep=[1]
ngroup=[1]
read covariates from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604869788d] 19/51748 (idx,y) = (19, 1)
read graph from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19601e7ee82]
file for locations=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196034bb84ca]
nlocations=[3044]
locations[0]=[1]
locations[1]=[2]
locations[2]=[3]
locations[3]=[4]
locations[4]=[5]
locations[5]=[6]
locations[6]=[7]
locations[7]=[8]
locations[8]=[9]
locations[9]=[10]
locations[10]=[11]
locations[11]=[12]
locations[12]=[13]
locations[13]=[14]
locations[14]=[15]
locations[15]=[16]
locations[16]=[17]
locations[17]=[18]
locations[18]=[19]
locations[19]=[20]
initialise log_precision (iid component)[4]
fixed=[0]
initialise log_precision (spatial component)[4]
fixed=[0]
adjust.for.con.comp[1]
scale.model[0]
read extra constraint from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960469961f]
Constraint[0]
A[3044] = 1.000000
A[3045] = 1.000000
A[3046] = 1.000000
A[3047] = 1.000000
A[3048] = 1.000000
A[3049] = 1.000000
A[3050] = 1.000000
A[3051] = 1.000000
A[3052] = 1.000000
A[3053] = 1.000000
A[3054] = 1.000000
A[3055] = 1.000000
A[3056] = 1.000000
A[3057] = 1.000000
A[3058] = 1.000000
A[3059] = 1.000000
A[3060] = 1.000000
A[3061] = 1.000000
A[3062] = 1.000000
A[3063] = 1.000000
A[3064] = 1.000000
e[0] = 0.000000
rank-deficiency is *defined* [1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[8] name=[bymID2] type=[FFIELD]
inla_parse_ffield...
section=[bymID2]
dir=[random.effect00000002]
model=[iid]
PRIOR->name=[loggamma]
hyperid=[1001|bymID2]
PRIOR->from_theta=[function (x) <<NEWLINE>>exp(x)]
PRIOR->to_theta = [function (x) <<NEWLINE>>log(x)]
PRIOR->PARAMETERS=[1, 5e-05]
correct=[-1]
constr=[1]
diagonal=[1.01511e-05]
id.names=<not present>
compute=[1]
nrep=[1]
ngroup=[1]
read covariates from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603237333d] 19/51748 (idx,y) = (19, 1)
read weights from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 1/51748 (idx,y) = (1, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 2/51748 (idx,y) = (2, 2)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 3/51748 (idx,y) = (3, 3)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 4/51748 (idx,y) = (4, 4)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 5/51748 (idx,y) = (5, 5)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 6/51748 (idx,y) = (6, 6)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 7/51748 (idx,y) = (7, 7)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 8/51748 (idx,y) = (8, 8)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 9/51748 (idx,y) = (9, 9)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 10/51748 (idx,y) = (10, 10)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 11/51748 (idx,y) = (11, 11)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 12/51748 (idx,y) = (12, 12)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 13/51748 (idx,y) = (13, 13)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 14/51748 (idx,y) = (14, 14)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 15/51748 (idx,y) = (15, 15)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 16/51748 (idx,y) = (16, 16)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19604605038c] 19/51748 (idx,y) = (19, 2)
file for locations=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196021db99c8]
nlocations=[3044]
locations[0]=[1]
locations[1]=[2]
locations[2]=[3]
locations[3]=[4]
locations[4]=[5]
locations[5]=[6]
locations[6]=[7]
locations[7]=[8]
locations[8]=[9]
locations[9]=[10]
locations[10]=[11]
locations[11]=[12]
locations[12]=[13]
locations[13]=[14]
locations[14]=[15]
locations[15]=[16]
locations[16]=[17]
locations[17]=[18]
locations[18]=[19]
locations[19]=[20]
cyclic=[0]
initialise log_precision[4]
fixed=[0]
computed/guessed rank-deficiency = [1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[9] name=[bymID3] type=[FFIELD]
inla_parse_ffield...
section=[bymID3]
dir=[random.effect00000003]
model=[iid]
PRIOR->name=[loggamma]
hyperid=[1001|bymID3]
PRIOR->from_theta=[function (x) <<NEWLINE>>exp(x)]
PRIOR->to_theta = [function (x) <<NEWLINE>>log(x)]
PRIOR->PARAMETERS=[1, 5e-05]
correct=[-1]
constr=[1]
diagonal=[1.01511e-05]
id.names=<not present>
compute=[1]
nrep=[1]
ngroup=[1]
read covariates from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960769e4e0d] 19/51748 (idx,y) = (19, 1)
read weights from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 15/51748 (idx,y) = (15, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196013167452] 19/51748 (idx,y) = (19, 0)
file for locations=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file1960732c003d]
nlocations=[3044]
locations[0]=[1]
locations[1]=[2]
locations[2]=[3]
locations[3]=[4]
locations[4]=[5]
locations[5]=[6]
locations[6]=[7]
locations[7]=[8]
locations[8]=[9]
locations[9]=[10]
locations[10]=[11]
locations[11]=[12]
locations[12]=[13]
locations[13]=[14]
locations[14]=[15]
locations[15]=[16]
locations[16]=[17]
locations[17]=[18]
locations[18]=[19]
locations[19]=[20]
cyclic=[0]
initialise log_precision[4]
fixed=[0]
computed/guessed rank-deficiency = [1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[4] name=[(Intercept)] type=[LINEAR]
inla_parse_linear...
section[(Intercept)]
dir=[fixed.effect00000001]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 0/51748 (idx,y) = (0, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 1/51748 (idx,y) = (1, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 2/51748 (idx,y) = (2, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 3/51748 (idx,y) = (3, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 4/51748 (idx,y) = (4, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 5/51748 (idx,y) = (5, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 6/51748 (idx,y) = (6, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 7/51748 (idx,y) = (7, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 8/51748 (idx,y) = (8, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 9/51748 (idx,y) = (9, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 10/51748 (idx,y) = (10, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 11/51748 (idx,y) = (11, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 12/51748 (idx,y) = (12, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 13/51748 (idx,y) = (13, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 14/51748 (idx,y) = (14, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 15/51748 (idx,y) = (15, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 16/51748 (idx,y) = (16, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19603e41234e] 19/51748 (idx,y) = (19, 1)
prior mean=[0]
prior precision=[0]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[5] name=[year_int] type=[LINEAR]
inla_parse_linear...
section[year_int]
dir=[fixed.effect00000002]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 1/51748 (idx,y) = (1, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 2/51748 (idx,y) = (2, 2)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 3/51748 (idx,y) = (3, 3)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 4/51748 (idx,y) = (4, 4)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 5/51748 (idx,y) = (5, 5)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 6/51748 (idx,y) = (6, 6)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 7/51748 (idx,y) = (7, 7)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 8/51748 (idx,y) = (8, 8)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 9/51748 (idx,y) = (9, 9)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 10/51748 (idx,y) = (10, 10)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 11/51748 (idx,y) = (11, 11)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 12/51748 (idx,y) = (12, 12)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 13/51748 (idx,y) = (13, 13)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 14/51748 (idx,y) = (14, 14)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 15/51748 (idx,y) = (15, 15)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 16/51748 (idx,y) = (16, 16)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file19602674f5d0] 19/51748 (idx,y) = (19, 2)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[6] name=[fix_2016] type=[LINEAR]
inla_parse_linear...
section[fix_2016]
dir=[fixed.effect00000003]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 15/51748 (idx,y) = (15, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/data.files/file196048b63e69] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
Index table: number of entries[7], total length[63927]
tag start-index length
Predictor 0 51748
bymID 51748 6088
bymID2 57836 3044
bymID3 60880 3044
(Intercept) 63924 1
year_int 63925 1
fix_2016 63926 1
parse section=[10] name=[INLA.Parameters] type=[INLA]
inla_parse_INLA...
section[INLA.Parameters]
lincomb.derived.only = [Yes]
lincomb.derived.correlation.matrix = [No]
global_node.factor = 2.000
global_node.degree = 2147483647
reordering = -1
Contents of ai_param 0x7ff9c9607a60
Optimiser: DEFAULT METHOD
Option for domin-BFGS: epsx = 0.005
Option for domin-BFGS: epsf = 1e-05 (rounding error)
Option for domin-BFGS: epsg = 0.005
Option for GSL-BFGS2: tol = 0.1
Option for GSL-BFGS2: step_size = 1
Option for GSL-BFGS2: epsx = 0.005
Option for GSL-BFGS2: epsf = 0.000353553
Option for GSL-BFGS2: epsg = 0.005
Restart: 0
Mode known: No
Gaussian approximation:
abserr_func = 0.0005
abserr_step = 0.0005
optpar_fp = 0
optpar_nr_step_factor = -0.1
Gaussian data: No
Strategy: Use a mean-skew corrected Gaussian by fitting a Skew-Normal
Fast mode: On
Use linear approximation to log(|Q +c|)? Yes
Method: Compute the derivative exact
Parameters for improved approximations
Number of points evaluate: 9
Step length to compute derivatives numerically: 0.000100002
Stencil to compute derivatives numerically: 5
Cutoff value to construct local neigborhood: 0.0001
Log calculations: On
Log calculated marginal for the hyperparameters: On
Integration strategy: Automatic (GRID for dim(theta)=1 and 2 and otherwise CCD)
f0 (CCD only): 1.100000
dz (GRID only): 0.750000
Adjust weights (GRID only): On
Difference in log-density limit (GRID only): 6.000000
Skip configurations with (presumed) small density (GRID only): On
Gradient is computed using Central difference with step-length 0.010000
Hessian is computed using Central difference with step-length 0.100000
Hessian matrix is forced to be a diagonal matrix? [No]
Compute effective number of parameters? [Yes]
Perform a Monte Carlo error-test? [No]
Interpolator [Auto]
CPO required diff in log-density [3]
Stupid search mode:
Status [On]
Max iter [1000]
Factor [1.05]
Numerical integration of hyperparameters:
Maximum number of function evaluations [100000]
Relative error ....................... [1e-05]
Absolute error ....................... [1e-06]
To stabilise the numerical optimisation:
Minimum value of the -Hessian [-inf]
CPO manual calculation[No]
Laplace-correction is Disabled.
inla_build: check for unused entries in[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/Model.ini]
inla_INLA...
Strategy = [DEFAULT]
Size is [63927]
Chose OpenMP-strategy [HUGE]
Chose density-strategy [LOW]
Size of graph=[63927] constraints=[3]
Found optimal reordering=[amdbarc] nnz(L)=[362312] and use_global_nodes(user)=[no]
List of hyperparameters:
theta[0] = [Log precision for bymID (idd component)]
theta[1] = [Log precision for bymID (spatial component)]
theta[2] = [Log precision for bymID2]
theta[3] = [Log precision for bymID3]
Optimise using DEFAULT METHOD
max.logdens= -36675.738411 fn= 1 theta= 3.990000 4.000000 4.000000 4.000000 range=[-3.634 6.778]
max.logdens= -36670.578884 fn= 2 theta= 4.000000 4.000000 4.010000 4.000000 range=[-3.622 6.778]
max.logdens= -36158.919986 fn= 9 theta= 3.772620 3.923048 4.970761 3.999691 range=[-2.613 6.709]
max.logdens= -36156.832422 fn= 11 theta= 3.762620 3.923048 4.970761 3.999691 range=[-2.613 6.708]
max.logdens= -36156.182307 fn= 12 theta= 3.772620 3.923048 4.980761 3.999691 range=[-2.604 6.708]
max.logdens= -36049.344703 fn= 18 theta= 3.545239 3.846096 5.941522 3.999383 range=[-1.839 6.540]
max.logdens= -36046.071997 fn= 19 theta= 3.535239 3.846096 5.941522 3.999383 range=[-1.839 6.540]
max.logdens= -36037.571367 fn= 27 theta= 3.599331 3.864402 5.710587 3.999456 range=[-2.003 6.594]
max.logdens= -36034.792226 fn= 28 theta= 3.589331 3.864402 5.710587 3.999456 range=[-2.003 6.594]
Iter=1 |grad|=305 |x-x.old|=0.881 |f-f.old|=640
max.logdens= -35678.556094 fn= 36 theta= 2.672998 3.526903 5.877925 3.999202 range=[-1.929 6.472]
max.logdens= -35678.298025 fn= 38 theta= 2.672998 3.526903 5.867925 3.999202 range=[-1.936 6.473]
max.logdens= -35674.273815 fn= 39 theta= 2.662998 3.526903 5.877925 3.999202 range=[-1.930 6.470]
max.logdens= -35655.418083 fn= 45 theta= -1.211880 2.111493 6.579711 3.998135 range=[-3.737 5.999]
max.logdens= -35647.181620 fn= 46 theta= -1.201880 2.111493 6.579711 3.998135 range=[-3.730 5.997]
max.logdens= -34917.010355 fn= 54 theta= 0.449285 2.716719 6.279629 3.998591 range=[-2.501 5.994]
max.logdens= -34916.408143 fn= 55 theta= 0.459285 2.716719 6.279629 3.998591 range=[-2.496 5.995]
max.logdens= -34915.860029 fn= 58 theta= 0.449285 2.716719 6.289629 3.998591 range=[-2.503 5.994]
Iter=2 |grad|=136 |x-x.old|=1.7 |f-f.old|=1.12e+03
max.logdens= -34897.771615 fn= 63 theta= 0.102462 2.210804 7.069417 3.998411 range=[-2.843 5.971]
max.logdens= -34897.326809 fn= 65 theta= 0.102462 2.210804 7.079417 3.998411 range=[-2.843 5.971]
max.logdens= -34895.275935 fn= 67 theta= 0.112462 2.210804 7.069417 3.998411 range=[-2.837 5.971]
max.logdens= -34890.142080 fn= 72 theta= 0.229604 2.396268 6.779888 3.998477 range=[-2.725 5.974]
max.logdens= -34888.066657 fn= 74 theta= 0.239604 2.396268 6.779888 3.998477 range=[-2.719 5.974]
Iter=3 |grad|=192 |x-x.old|=0.317 |f-f.old|=26.9
max.logdens= -34846.139790 fn= 81 theta= 0.388895 2.199726 7.095962 3.998376 range=[-2.704 5.983]
max.logdens= -34845.720595 fn= 82 theta= 0.388895 2.199726 7.105962 3.998376 range=[-2.704 5.983]
max.logdens= -34845.179776 fn= 84 theta= 0.398895 2.199726 7.095962 3.998376 range=[-2.699 5.983]
max.logdens= -34821.559501 fn= 91 theta= 0.848121 1.633109 8.007183 3.998084 range=[-2.648 5.968]
max.logdens= -34821.526668 fn= 92 theta= 0.848121 1.633109 8.017183 3.998084 range=[-2.648 5.968]
max.logdens= -34821.478854 fn= 93 theta= 0.848121 1.633109 7.997183 3.998084 range=[-2.647 5.969]
max.logdens= -34820.049162 fn= 95 theta= 0.838121 1.633109 8.007183 3.998084 range=[-2.651 5.969]
max.logdens= -34814.504956 fn= 100 theta= 0.686396 1.832654 7.686280 3.998187 range=[-2.665 5.981]
max.logdens= -34814.418521 fn= 101 theta= 0.686396 1.832654 7.696280 3.998187 range=[-2.665 5.981]
max.logdens= -34813.917762 fn= 103 theta= 0.676396 1.832654 7.686280 3.998187 range=[-2.669 5.981]
Iter=4 |grad|=79.5 |x-x.old|=0.58 |f-f.old|=75.6
max.logdens= -34782.738200 fn= 109 theta= 0.589652 1.127472 8.387859 3.964321 range=[-2.866 5.973]
max.logdens= -34782.724605 fn= 110 theta= 0.589652 1.127472 8.377859 3.964321 range=[-2.866 5.973]
max.logdens= -34782.596429 fn= 112 theta= 0.599652 1.127472 8.387859 3.964321 range=[-2.863 5.972]
max.logdens= -34782.395539 fn= 117 theta= 0.589652 1.117472 8.387859 3.964321 range=[-2.869 5.973]
max.logdens= -34776.474035 fn= 119 theta= 0.546117 0.810141 8.703570 3.949081 range=[-2.964 5.975]
max.logdens= -34776.441002 fn= 120 theta= 0.546117 0.810141 8.693570 3.949081 range=[-2.964 5.975]
max.logdens= -34775.936589 fn= 123 theta= 0.556117 0.810141 8.703570 3.949081 range=[-2.961 5.974]
max.logdens= -34775.237325 fn= 131 theta= 0.514759 0.508676 9.003495 3.934603 range=[-3.053 5.978]
max.logdens= -34774.840047 fn= 140 theta= 0.535438 0.659408 8.853532 3.941842 range=[-3.007 5.976]
Iter=5 |grad|=76.8 |x-x.old|=0.832 |f-f.old|=38.9
max.logdens= -34763.725790 fn= 146 theta= 0.758812 -0.065781 9.500251 3.904536 range=[-3.145 5.968]
max.logdens= -34763.682215 fn= 148 theta= 0.758812 -0.065781 9.490251 3.904536 range=[-3.145 5.968]
max.logdens= -34763.520899 fn= 150 theta= 0.768812 -0.065781 9.500251 3.904536 range=[-3.142 5.967]
Iter=6 |grad|=23.7 |x-x.old|=0.5 |f-f.old|=11.9
max.logdens= -34762.882018 fn= 156 theta= 0.796044 0.020172 9.422845 3.906158 range=[-3.111 5.963]
max.logdens= -34762.831504 fn= 158 theta= 0.796044 0.020172 9.412845 3.906158 range=[-3.111 5.963]
Iter=7 |grad|=6.71 |x-x.old|=0.0608 |f-f.old|=0.844
max.logdens= -34761.122758 fn= 165 theta= 0.835697 -0.063701 9.139125 3.865486 range=[-3.123 5.964]
max.logdens= -34761.065930 fn= 167 theta= 0.835697 -0.063701 9.129125 3.865486 range=[-3.123 5.965]
max.logdens= -34759.648964 fn= 174 theta= 0.875350 -0.147575 8.855406 3.824814 range=[-3.135 5.966]
max.logdens= -34759.592953 fn= 175 theta= 0.875350 -0.147575 8.845406 3.824814 range=[-3.135 5.966]
max.logdens= -34759.562293 fn= 178 theta= 0.865350 -0.147575 8.855406 3.824814 range=[-3.138 5.967]
max.logdens= -34758.577688 fn= 183 theta= 0.915004 -0.231449 8.571686 3.784142 range=[-3.147 5.969]
max.logdens= -34758.528474 fn= 184 theta= 0.915004 -0.231449 8.561686 3.784142 range=[-3.147 5.969]
max.logdens= -34758.473009 fn= 187 theta= 0.905004 -0.231449 8.571686 3.784142 range=[-3.150 5.970]
max.logdens= -34758.136565 fn= 192 theta= 0.954657 -0.315322 8.287966 3.743470 range=[-3.159 5.973]
max.logdens= -34758.128594 fn= 193 theta= 0.954657 -0.315322 8.297966 3.743470 range=[-3.159 5.973]
max.logdens= -34758.103726 fn= 194 theta= 0.954657 -0.315322 8.277966 3.743470 range=[-3.159 5.973]
max.logdens= -34758.029938 fn= 195 theta= 0.944657 -0.315322 8.287966 3.743470 range=[-3.161 5.973]
Iter=8 |grad|=13.3 |x-x.old|=0.578 |f-f.old|=4.75 Reached numerical limit!
Number of function evaluations = 235
Compute the Hessian using central differences and step_size[0.1]. Matrix-type [dense]
max.logdens= -34757.764867 fn= 242 theta= 0.948331 -0.301942 8.233226 3.749958 range=[-3.155 5.974]
Mode not sufficient accurate; switch to a stupid local search strategy.
max.logdens= -34757.710207 fn= 245 theta= 0.948331 -0.301942 8.233226 3.644958 range=[-3.155 5.974]
max.logdens= -34757.464980 fn= 250 theta= 0.948331 -0.301942 8.128226 3.749958 range=[-3.152 5.975]
max.logdens= -34757.457805 fn= 251 theta= 0.948331 -0.196942 8.233226 3.749958 range=[-3.123 5.972]
max.logdens= -34757.406317 fn= 255 theta= 0.948331 -0.196942 8.233226 3.639708 range=[-3.123 5.972]
max.logdens= -34757.116722 fn= 259 theta= 0.838081 -0.196942 8.233226 3.749958 range=[-3.147 5.976]
max.logdens= -34757.083785 fn= 261 theta= 0.948331 -0.196942 8.122976 3.749958 range=[-3.120 5.974]
max.logdens= -34757.041336 fn= 264 theta= 0.948331 -0.196942 8.122976 3.634196 range=[-3.120 5.974]
max.logdens= -34757.012325 fn= 267 theta= 0.832569 -0.196942 8.122976 3.749958 range=[-3.146 5.977]
max.logdens= -34756.858543 fn= 268 theta= 0.948331 -0.196942 8.007214 3.749958 range=[-3.117 5.976]
max.logdens= -34756.824445 fn= 272 theta= 0.948331 -0.196942 8.007214 3.628408 range=[-3.117 5.976]
max.logdens= -34756.764197 fn= 281 theta= 0.948331 -0.196942 8.007214 3.500780 range=[-3.117 5.977]
max.logdens= -34756.683714 fn= 291 theta= 0.948331 -0.196942 8.007214 3.366770 range=[-3.117 5.977]
max.logdens= -34756.579923 fn= 302 theta= 0.948331 -0.196942 8.007214 3.226060 range=[-3.117 5.977]
max.logdens= -34756.451351 fn= 311 theta= 0.948331 -0.196942 8.007214 3.078314 range=[-3.117 5.978]
max.logdens= -34756.297146 fn= 320 theta= 0.948331 -0.196942 8.007214 2.923182 range=[-3.117 5.979]
max.logdens= -34756.120650 fn= 329 theta= 0.948331 -0.196942 8.007214 2.760292 range=[-3.117 5.979]
max.logdens= -34755.929839 fn= 337 theta= 0.948331 -0.196942 8.007214 2.589258 range=[-3.116 5.980]
max.logdens= -34755.744611 fn= 344 theta= 0.948331 -0.196942 8.007214 2.409673 range=[-3.116 5.981]
max.logdens= -34755.602380 fn= 355 theta= 0.948331 -0.196942 8.007214 2.221108 range=[-3.116 5.982]
max.logdens= -34755.600761 fn= 359 theta= 0.948331 -0.196942 8.007214 2.409673 range=[-3.116 5.981]
max.logdens= -34755.540408 fn= 372 theta= 0.948331 -0.196942 7.818649 2.221108 range=[-3.110 5.986]
max.logdens= -34755.332544 fn= 389 theta= 0.948331 -0.196942 7.818649 2.023114 range=[-3.110 5.988]
max.logdens= -34755.318054 fn= 397 theta= 0.948331 -0.196942 7.818649 1.815222 range=[-3.110 5.989]
max.logdens= -34755.299714 fn= 403 theta= 0.948331 -0.196942 8.026542 2.023114 range=[-3.117 5.983]
max.logdens= -34755.200590 fn= 405 theta= 0.948331 -0.196942 8.026542 1.804827 range=[-3.117 5.985]
317.118516 117.366132 15.537666 0.303264
117.366132 90.859228 4.874731 0.031981
15.537666 4.874731 15.675235 0.545967
0.303264 0.031981 0.545967 9.111124
Eigenvectors of the Hessian
0.919438 0.387650 0.065935 0.003714
0.390536 -0.919798 -0.038106 -0.000312
0.045985 0.060693 -0.992961 -0.090719
0.000882 0.003795 -0.090712 0.995870
Eigenvalues of the Hessian
367.747832
41.073319
14.880441
9.062510
StDev/Correlation matrix (scaled inverse Hessian)
0.079064 -0.685408 -0.182841 0.001687
0.145294 0.032790 0.002364
0.259351 -0.045460
0.331645
max.logdens= -34755.171608 fn= 596 theta= 0.827358 0.090098 8.007601 1.671391 range=[-3.060 5.987]
Compute corrected stdev for theta[0]: negative 3.163945 positive 0.713548
Compute corrected stdev for theta[1]: negative 1.000000 positive 0.700979
Compute corrected stdev for theta[2]: negative 1.115410 positive 0.831857
Compute corrected stdev for theta[3]: negative 0.709666 positive 2.385180
config 0/25=[ -0.00 -0.00 0.00 5.25] log(rel.dens)=-1.47, [1] accept, compute, 935.54s
config 1/25=[ 0.78 -1.10 0.92 2.62] log(rel.dens)=-1.64, [3] accept, compute, 936.18s
config 2/25=[ -3.48 0.77 -1.23 2.62] log(rel.dens)=-4.98, [2] accept, compute, 939.44s
config 3/25=[ 0.00 0.00 0.00 0.00] log(rel.dens)=-0.09, [0] accept, compute, 940.60s
config 4/25=[ 0.78 -1.10 0.92 -0.78] log(rel.dens)=-1.62, [3] accept, compute, 881.01s
config 5/25=[ -0.00 -0.00 0.00 -1.56] log(rel.dens)=-2.41, [1] accept, compute, 882.28s
config 6/25=[ 1.57 0.00 0.00 0.00] log(rel.dens)=-2.73, [0] accept, compute, 880.61s
config 7/25=[ -3.48 0.77 -1.23 -0.78] log(rel.dens)=-5.44, [2] accept, compute, 881.69s
config 8/25=[ 0.78 0.77 -1.23 2.62] log(rel.dens)=-2.87, [3] accept, compute, 962.19s
config 9/25=[ -3.48 -1.10 -1.23 2.62] log(rel.dens)=-4.44, [1] accept, compute, 963.17s
config 10/25=[ -6.96 -0.00 0.00 -0.00] log(rel.dens)=-18.45, [0] accept, compute, 964.14s
config 11/25=[ -3.48 0.77 0.92 2.62] log(rel.dens)=-5.19, [2] accept, compute, 965.14s
config 12/25=[ 0.78 0.77 -1.23 -0.78] log(rel.dens)=-3.21, [3] accept, compute, 859.96s
config 13/25=[ -3.48 -1.10 -1.23 -0.78] log(rel.dens)=-4.94, [1] accept, compute, 859.85s
config 14/25=[ 0.00 1.54 -0.00 -0.00] log(rel.dens)=-2.72, [0] accept, compute, 858.71s
config 15/25=[ -3.48 0.77 0.92 -0.78] log(rel.dens)=-5.17, [2] accept, compute, 858.69s
config 16/25=[ 0.78 0.77 0.92 2.62] log(rel.dens)=-3.18, [3] accept, compute, 835.62s
config 17/25=[ -3.48 -1.10 0.92 2.62] log(rel.dens)=-4.23, [1] accept, compute, 835.09s
config 18/25=[ 0.78 -1.10 -1.23 2.62] log(rel.dens)=-1.24, [2] accept, compute, 838.77s
config 19/25=[ -0.00 -2.20 0.00 0.00] log(rel.dens)=-0.06, [0] accept, compute, 842.61s
config 20/25=[ -3.48 -1.10 0.92 -0.78] log(rel.dens)=-4.20, [1] accept, compute, 876.26s
config 21/25=[ 0.78 0.77 0.92 -0.78] log(rel.dens)=-3.22, [3] accept, compute, 876.42s
config 22/25=[ 0.78 -1.10 -1.23 -0.78] log(rel.dens)=-1.58, [2] accept, compute, 872.55s
config 23/25=[ -0.00 -0.00 1.83 -0.00] log(rel.dens)=-2.44, [0] accept, compute, 871.59s
config 24/25=[ -0.00 -0.00 -2.45 -0.00] log(rel.dens)=-2.14, [0] accept, compute, 287.72s
Combine the densities with relative weights:
config 0/25=[ 0.00 0.00 0.00 0.00] weight = 0.434 neff = 2327.46
config 1/25=[ 1.57 0.00 0.00 0.00] weight = 0.069 neff = 2298.27
config 2/25=[ -6.96 -0.00 0.00 -0.00] weight = 0.000 neff = 2452.54
config 3/25=[ 0.00 1.54 -0.00 -0.00] weight = 0.069 neff = 2328.59
config 4/25=[ -0.00 -2.20 0.00 0.00] weight = 1.000 neff = 2340.17
config 5/25=[ -0.00 -0.00 1.83 -0.00] weight = 0.093 neff = 2394.00
config 6/25=[ -0.00 -0.00 -2.45 -0.00] weight = 0.125 neff = 2271.93
config 7/25=[ -0.00 -0.00 0.00 5.25] weight = 0.243 neff = 2222.51
config 8/25=[ -0.00 -0.00 0.00 -1.56] weight = 0.095 neff = 2408.56
config 9/25=[ -3.48 -1.10 -1.23 2.62] weight = 0.012 neff = 2290.30
config 10/25=[ -3.48 -1.10 -1.23 -0.78] weight = 0.008 neff = 2402.54
config 11/25=[ -3.48 -1.10 0.92 2.62] weight = 0.015 neff = 2351.18
config 12/25=[ -3.48 -1.10 0.92 -0.78] weight = 0.016 neff = 2462.43
config 13/25=[ -3.48 0.77 -1.23 2.62] weight = 0.007 neff = 2281.88
config 14/25=[ -3.48 0.77 -1.23 -0.78] weight = 0.005 neff = 2394.01
config 15/25=[ -3.48 0.77 0.92 2.62] weight = 0.006 neff = 2343.75
config 16/25=[ -3.48 0.77 0.92 -0.78] weight = 0.006 neff = 2454.93
config 17/25=[ 0.78 -1.10 -1.23 2.62] weight = 0.307 neff = 2209.31
config 18/25=[ 0.78 -1.10 -1.23 -0.78] weight = 0.218 neff = 2321.51
config 19/25=[ 0.78 -1.10 0.92 2.62] weight = 0.206 neff = 2272.25
config 20/25=[ 0.78 -1.10 0.92 -0.78] weight = 0.210 neff = 2383.29
config 21/25=[ 0.78 0.77 -1.23 2.62] weight = 0.060 neff = 2204.50
config 22/25=[ 0.78 0.77 -1.23 -0.78] weight = 0.043 neff = 2316.57
config 23/25=[ 0.78 0.77 0.92 2.62] weight = 0.044 neff = 2268.51
config 24/25=[ 0.78 0.77 0.92 -0.78] weight = 0.042 neff = 2379.48
Done.
Expected effective number of parameters: 2312.527(56.974), eqv.#replicates: 22.377
DIC:
Mean of Deviance................. 64681.2
Deviance at Mean................. 62422.3
Effective number of parameters... 2258.98
DIC.............................. 66940.2
Marginal likelihood: Integration -34759.359787 Gaussian-approx -34758.904549
Compute the marginal for each of the 4 hyperparameters
Interpolation method: Auto
Compute the marginal for theta[0] to theta[3] using numerical integration...
Compute the marginal for theta[0] to theta[3] using numerical integration... Done.
Compute the marginal for the hyperparameters... done.
Store results in directory[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/results.files]
Wall-clock time used on [/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file196099c269f/Model.ini]
Preparations : 0.100 seconds
Approx inference: 5927.039 seconds [0.1|0.0|4.2|95.5|0.3]%
Output : 4.041 seconds
---------------------------------
Total : 5931.181 seconds
covariates <- read_csv("Census_data/census_covariates_Fortaleza_01_03_19.csv",
col_types = cols(Cod_setor = col_character()))
Calculate LII
covariates <- covariates %>% mutate(Total_no_HH_in_CT=replace(Total_no_HH_in_CT, is.na(Total_no_HH_in_CT), 0), Total_HH_inc_in_CT=replace(Total_HH_inc_in_CT, is.na(Total_HH_inc_in_CT), 0), Mean_HH_inc=replace(Mean_HH_inc, is.na(Mean_HH_inc), 0))
covariates$LII <- NA
for (i in 1:3044){
CT_Code <- CT_shp@data$CD_GEOCODI[i]
neighbors_codes <- CT_shp@data$CD_GEOCODI[CT_wm[[i]]]
total_nb_inc <- sum(covariates[(covariates$Cod_setor %in% neighbors_codes),]$Total_HH_inc_in_CT)
total_nb_hh <- sum(covariates[(covariates$Cod_setor %in% neighbors_codes),]$Total_no_HH_in_CT)
Mean_nb_inc <- total_nb_inc / total_nb_hh
LII <- Mean_nb_inc / covariates[(covariates$Cod_setor)==CT_Code,]$Mean_HH_inc
covariates[(covariates$Cod_setor==CT_Code),]$LII <- LII
}
covariates$LII[covariates$LII==Inf] <- NA
covariates$log_LII <- log(covariates$LII)
BYM_data_covar <- BYM_data %>% left_join(covariates, by=c("CD_GEOCODI"="Cod_setor")) %>% mutate(log_mean_HH_inc=log(Mean_HH_inc)) %>% arrange(CD_GEOCODI)
BYM_data_covar <- BYM_data_covar %>% mutate(log_mean_HH_inc=replace(log_mean_HH_inc, log_mean_HH_inc==-Inf | is.na(log_mean_HH_inc), 0), log_LII=replace(log_LII, log_LII==-Inf | is.na(log_LII), 0), Perc_Wtr_Spply_Ntwrk=replace(Perc_Wtr_Spply_Ntwrk, is.na(Perc_Wtr_Spply_Ntwrk), 0), Perc_branca=replace(Perc_branca, is.na(Perc_branca), 0), Perc_Garbage_Col_Serv=replace(Perc_Garbage_Col_Serv, is.na(Perc_Garbage_Col_Serv), 0), Perc_PPH_Elec=replace(Perc_PPH_Elec, is.na(Perc_PPH_Elec), 0), Lit_rate=replace(Lit_rate, is.na(Lit_rate), 0), ICE=replace(ICE, is.na(ICE), 0))
BYM_data_covar <- BYM_data_covar %>% mutate(ICE_quant=cut(ICE, breaks=quantile(BYM_data_covar$ICE, probs=c(seq(0,1,0.25),1)[1:5]), include.lowest=TRUE))
BYM_data_covar <- BYM_data_covar %>% mutate(log_inc_quant=cut(log_mean_HH_inc, breaks=quantile(BYM_data_covar$log_mean_HH_inc, probs=c(seq(0,1,0.25),1)[1:5]), include.lowest=TRUE))
BYM_data_covar <- BYM_data_covar %>% mutate(log_LII_quant=cut(log_LII, breaks=quantile(BYM_data_covar$log_LII, probs=c(seq(0,1,0.25),1)[1:5]), include.lowest=TRUE))
BYM_data_covar <- BYM_data_covar %>% mutate(log_inc_demean=log_mean_HH_inc-mean(BYM_data_covar$log_mean_HH_inc, na.rm=TRUE))
BYM_data_covar <- BYM_data_covar %>% mutate(Perc_branca_demean=Perc_branca-mean(BYM_data_covar$Perc_branca, na.rm=TRUE))
BYM_data_covar <- BYM_data_covar %>% mutate(Lit_rate_demean=Lit_rate-mean(BYM_data_covar$Lit_rate, na.rm=TRUE))
formula_yrlytrnd_2016fix_covar <- y ~ 1 + f(bymID, model="bym",graph=CT_adj, constr=TRUE) + f(bymID2, year_int, model="iid", constr=TRUE) + year_int + f(bymID3, fix_2016, model="iid", constr=TRUE) + fix_2016 + log_inc_quant + ICE_quant + log_LII_quant + Lit_rate_demean + Perc_branca_demean
model_yrlytrnd_2016fix_covar <- inla(formula_yrlytrnd_2016fix_covar, family="poisson", data=BYM_data_covar, E=E, verbose=TRUE, control.compute=list(dic=TRUE), control.predictor=list(compute=TRUE))
hgid: 29c6a7f1b1ff date: Thu Jun 15 19:50:23 2017 +0800
Report bugs to <help@r-inla.org>
Processing file [/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/Model.ini] max_threads=[4]
inla_build...
number of sections=[23]
parse section=[0] name=[INLA.libR] type=[LIBR]
inla_parse_libR...
section[INLA.libR]
R_HOME=[/Library/Frameworks/R.framework/Resources]
parse section=[22] name=[INLA.Expert] type=[EXPERT]
inla_parse_expert...
section[INLA.Expert]
disable.gaussian.check=[0]
cpo.manual=[0]
jp.Rfile=[(null)]
jp.RData=NULL
jp.func=[(null)]
parse section=[1] name=[INLA.Model] type=[PROBLEM]
inla_parse_problem...
name=[INLA.Model]
openmp.strategy=[default]
store results in directory=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/results.files]
output:
cpo=[0]
po=[0]
dic=[1]
kld=[1]
mlik=[1]
q=[0]
graph=[0]
gdensity=[0]
hyperparameters=[1]
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[3] name=[Predictor] type=[PREDICTOR]
inla_parse_predictor ...
section=[Predictor]
dir=[predictor]
PRIOR->name=[loggamma]
hyperid=[53001|Predictor]
PRIOR->from_theta=[function (x) <<NEWLINE>>exp(x)]
PRIOR->to_theta = [function (x) <<NEWLINE>>log(x)]
PRIOR->PARAMETERS=[1, 1e-05]
initialise log_precision[12]
fixed=[1]
user.scale=[1]
n=[51748]
m=[0]
ndata=[51748]
compute=[1]
read offsets from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960361eac9a] 19/51748 (idx,y) = (19, 0)
Aext=[(null)]
AextPrecision=[1e+08]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[2] name=[INLA.Data1] type=[DATA]
inla_parse_data [section 1]...
tag=[INLA.Data1]
family=[POISSON]
likelihood=[POISSON]
file->name=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055db5220]
file->name=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196031ecdee9]
read n=[155244] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055db5220]
0/51748 (idx,a,y,d) = (0, 0.872178, 0, 1)
1/51748 (idx,a,y,d) = (1, 0.872178, 1, 1)
2/51748 (idx,a,y,d) = (2, 0.872178, 0, 1)
3/51748 (idx,a,y,d) = (3, 0.872178, 0, 1)
4/51748 (idx,a,y,d) = (4, 0.872178, 0, 1)
5/51748 (idx,a,y,d) = (5, 0.872178, 1, 1)
6/51748 (idx,a,y,d) = (6, 0.872178, 1, 1)
7/51748 (idx,a,y,d) = (7, 0.872178, 0, 1)
8/51748 (idx,a,y,d) = (8, 0.872178, 0, 1)
9/51748 (idx,a,y,d) = (9, 0.872178, 1, 1)
10/51748 (idx,a,y,d) = (10, 0.872178, 0, 1)
11/51748 (idx,a,y,d) = (11, 0.872178, 1, 1)
12/51748 (idx,a,y,d) = (12, 0.872178, 1, 1)
13/51748 (idx,a,y,d) = (13, 0.872178, 5, 1)
14/51748 (idx,a,y,d) = (14, 0.872178, 1, 1)
15/51748 (idx,a,y,d) = (15, 0.872178, 0, 1)
16/51748 (idx,a,y,d) = (16, 0.872178, 0, 1)
17/51748 (idx,a,y,d) = (17, 0.287131, 0, 1)
18/51748 (idx,a,y,d) = (18, 0.287131, 0, 1)
19/51748 (idx,a,y,d) = (19, 0.287131, 0, 1)
likelihood.variant=[0]
Link model [LOG]
Link order [-1]
Link variant [-1]
Link ntheta [0]
mix.use[0]
parse section=[18] name=[bymID] type=[FFIELD]
inla_parse_ffield...
section=[bymID]
dir=[random.effect00000001]
model=[bym]
PRIOR0->name=[loggamma]
hyperid=[10001|bymID]
PRIOR0->from_theta=[function (x) <<NEWLINE>>exp(x)]
PRIOR0->to_theta = [function (x) <<NEWLINE>>log(x)]
PRIOR0->PARAMETERS0=[1, 0.0005]
PRIOR1->name=[loggamma]
hyperid=[10002|bymID]
PRIOR1->from_theta=[function (x) <<NEWLINE>>exp(x)]
PRIOR1->to_theta = [function (x) <<NEWLINE>>log(x)]
PRIOR1->PARAMETERS1=[1, 0.0005]
correct=[-1]
constr=[0]
diagonal=[1.01511e-05]
id.names=<not present>
compute=[1]
nrep=[1]
ngroup=[1]
read covariates from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196063125a30] 19/51748 (idx,y) = (19, 1)
read graph from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601252a05a]
file for locations=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960529ce939]
nlocations=[3044]
locations[0]=[1]
locations[1]=[2]
locations[2]=[3]
locations[3]=[4]
locations[4]=[5]
locations[5]=[6]
locations[6]=[7]
locations[7]=[8]
locations[8]=[9]
locations[9]=[10]
locations[10]=[11]
locations[11]=[12]
locations[12]=[13]
locations[13]=[14]
locations[14]=[15]
locations[15]=[16]
locations[16]=[17]
locations[17]=[18]
locations[18]=[19]
locations[19]=[20]
initialise log_precision (iid component)[4]
fixed=[0]
initialise log_precision (spatial component)[4]
fixed=[0]
adjust.for.con.comp[1]
scale.model[0]
read extra constraint from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196049df3820]
Constraint[0]
A[3044] = 1.000000
A[3045] = 1.000000
A[3046] = 1.000000
A[3047] = 1.000000
A[3048] = 1.000000
A[3049] = 1.000000
A[3050] = 1.000000
A[3051] = 1.000000
A[3052] = 1.000000
A[3053] = 1.000000
A[3054] = 1.000000
A[3055] = 1.000000
A[3056] = 1.000000
A[3057] = 1.000000
A[3058] = 1.000000
A[3059] = 1.000000
A[3060] = 1.000000
A[3061] = 1.000000
A[3062] = 1.000000
A[3063] = 1.000000
A[3064] = 1.000000
e[0] = 0.000000
rank-deficiency is *defined* [1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[19] name=[bymID2] type=[FFIELD]
inla_parse_ffield...
section=[bymID2]
dir=[random.effect00000002]
model=[iid]
PRIOR->name=[loggamma]
hyperid=[1001|bymID2]
PRIOR->from_theta=[function (x) <<NEWLINE>>exp(x)]
PRIOR->to_theta = [function (x) <<NEWLINE>>log(x)]
PRIOR->PARAMETERS=[1, 5e-05]
correct=[-1]
constr=[1]
diagonal=[1.01511e-05]
id.names=<not present>
compute=[1]
nrep=[1]
ngroup=[1]
read covariates from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196079f4a76c] 19/51748 (idx,y) = (19, 1)
read weights from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 1/51748 (idx,y) = (1, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 2/51748 (idx,y) = (2, 2)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 3/51748 (idx,y) = (3, 3)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 4/51748 (idx,y) = (4, 4)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 5/51748 (idx,y) = (5, 5)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 6/51748 (idx,y) = (6, 6)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 7/51748 (idx,y) = (7, 7)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 8/51748 (idx,y) = (8, 8)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 9/51748 (idx,y) = (9, 9)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 10/51748 (idx,y) = (10, 10)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 11/51748 (idx,y) = (11, 11)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 12/51748 (idx,y) = (12, 12)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 13/51748 (idx,y) = (13, 13)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 14/51748 (idx,y) = (14, 14)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 15/51748 (idx,y) = (15, 15)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 16/51748 (idx,y) = (16, 16)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602d1be201] 19/51748 (idx,y) = (19, 2)
file for locations=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19606e9d7e1b]
nlocations=[3044]
locations[0]=[1]
locations[1]=[2]
locations[2]=[3]
locations[3]=[4]
locations[4]=[5]
locations[5]=[6]
locations[6]=[7]
locations[7]=[8]
locations[8]=[9]
locations[9]=[10]
locations[10]=[11]
locations[11]=[12]
locations[12]=[13]
locations[13]=[14]
locations[14]=[15]
locations[15]=[16]
locations[16]=[17]
locations[17]=[18]
locations[18]=[19]
locations[19]=[20]
cyclic=[0]
initialise log_precision[4]
fixed=[0]
computed/guessed rank-deficiency = [1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[20] name=[bymID3] type=[FFIELD]
inla_parse_ffield...
section=[bymID3]
dir=[random.effect00000003]
model=[iid]
PRIOR->name=[loggamma]
hyperid=[1001|bymID3]
PRIOR->from_theta=[function (x) <<NEWLINE>>exp(x)]
PRIOR->to_theta = [function (x) <<NEWLINE>>log(x)]
PRIOR->PARAMETERS=[1, 5e-05]
correct=[-1]
constr=[1]
diagonal=[1.01511e-05]
id.names=<not present>
compute=[1]
nrep=[1]
ngroup=[1]
read covariates from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960947e321] 19/51748 (idx,y) = (19, 1)
read weights from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 15/51748 (idx,y) = (15, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19604e909049] 19/51748 (idx,y) = (19, 0)
file for locations=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960192c6ca]
nlocations=[3044]
locations[0]=[1]
locations[1]=[2]
locations[2]=[3]
locations[3]=[4]
locations[4]=[5]
locations[5]=[6]
locations[6]=[7]
locations[7]=[8]
locations[8]=[9]
locations[9]=[10]
locations[10]=[11]
locations[11]=[12]
locations[12]=[13]
locations[13]=[14]
locations[14]=[15]
locations[15]=[16]
locations[16]=[17]
locations[17]=[18]
locations[18]=[19]
locations[19]=[20]
cyclic=[0]
initialise log_precision[4]
fixed=[0]
computed/guessed rank-deficiency = [1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[4] name=[(Intercept)] type=[LINEAR]
inla_parse_linear...
section[(Intercept)]
dir=[fixed.effect00000001]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 0/51748 (idx,y) = (0, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 1/51748 (idx,y) = (1, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 2/51748 (idx,y) = (2, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 3/51748 (idx,y) = (3, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 4/51748 (idx,y) = (4, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 5/51748 (idx,y) = (5, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 6/51748 (idx,y) = (6, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 7/51748 (idx,y) = (7, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 8/51748 (idx,y) = (8, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 9/51748 (idx,y) = (9, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 10/51748 (idx,y) = (10, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 11/51748 (idx,y) = (11, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 12/51748 (idx,y) = (12, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 13/51748 (idx,y) = (13, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 14/51748 (idx,y) = (14, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 15/51748 (idx,y) = (15, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 16/51748 (idx,y) = (16, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196017d5ce38] 19/51748 (idx,y) = (19, 1)
prior mean=[0]
prior precision=[0]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[5] name=[year_int] type=[LINEAR]
inla_parse_linear...
section[year_int]
dir=[fixed.effect00000002]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 1/51748 (idx,y) = (1, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 2/51748 (idx,y) = (2, 2)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 3/51748 (idx,y) = (3, 3)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 4/51748 (idx,y) = (4, 4)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 5/51748 (idx,y) = (5, 5)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 6/51748 (idx,y) = (6, 6)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 7/51748 (idx,y) = (7, 7)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 8/51748 (idx,y) = (8, 8)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 9/51748 (idx,y) = (9, 9)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 10/51748 (idx,y) = (10, 10)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 11/51748 (idx,y) = (11, 11)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 12/51748 (idx,y) = (12, 12)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 13/51748 (idx,y) = (13, 13)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 14/51748 (idx,y) = (14, 14)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 15/51748 (idx,y) = (15, 15)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 16/51748 (idx,y) = (16, 16)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196055d5cac1] 19/51748 (idx,y) = (19, 2)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[6] name=[fix_2016] type=[LINEAR]
inla_parse_linear...
section[fix_2016]
dir=[fixed.effect00000003]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 15/51748 (idx,y) = (15, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196046f270ed] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[7] name=[log_inc_quant(6.95,7.3] type=[LINEAR]
inla_parse_linear...
section[log_inc_quant(6.95,7.3]
dir=[fixed.effect00000004]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056d3fbfe] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[8] name=[log_inc_quant(7.3,7.81] type=[LINEAR]
inla_parse_linear...
section[log_inc_quant(7.3,7.81]
dir=[fixed.effect00000005]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196077450d3a] 19/51748 (idx,y) = (19, 1)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[9] name=[log_inc_quant(7.81,9.99] type=[LINEAR]
inla_parse_linear...
section[log_inc_quant(7.81,9.99]
dir=[fixed.effect00000006]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196056679802] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[10] name=[ICE_quant(-0.185,-0.0955] type=[LINEAR]
inla_parse_linear...
section[ICE_quant(-0.185,-0.0955]
dir=[fixed.effect00000007]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602b2cd79f] 19/51748 (idx,y) = (19, 1)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[11] name=[ICE_quant(-0.0955,-0.00566] type=[LINEAR]
inla_parse_linear...
section[ICE_quant(-0.0955,-0.00566]
dir=[fixed.effect00000008]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file1960d001dde] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[12] name=[ICE_quant(-0.00566,0.888] type=[LINEAR]
inla_parse_linear...
section[ICE_quant(-0.00566,0.888]
dir=[fixed.effect00000009]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19602a8e07d] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[13] name=[log_LII_quant(-0.169,0.07] type=[LINEAR]
inla_parse_linear...
section[log_LII_quant(-0.169,0.07]
dir=[fixed.effect00000010]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601d2a2fe8] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[14] name=[log_LII_quant(0.07,0.337] type=[LINEAR]
inla_parse_linear...
section[log_LII_quant(0.07,0.337]
dir=[fixed.effect00000011]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603caf374d] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[15] name=[log_LII_quant(0.337,2.3] type=[LINEAR]
inla_parse_linear...
section[log_LII_quant(0.337,2.3]
dir=[fixed.effect00000012]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 0/51748 (idx,y) = (0, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 1/51748 (idx,y) = (1, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 2/51748 (idx,y) = (2, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 3/51748 (idx,y) = (3, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 4/51748 (idx,y) = (4, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 5/51748 (idx,y) = (5, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 6/51748 (idx,y) = (6, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 7/51748 (idx,y) = (7, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 8/51748 (idx,y) = (8, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 9/51748 (idx,y) = (9, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 10/51748 (idx,y) = (10, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 11/51748 (idx,y) = (11, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 12/51748 (idx,y) = (12, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 13/51748 (idx,y) = (13, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 14/51748 (idx,y) = (14, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 15/51748 (idx,y) = (15, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 16/51748 (idx,y) = (16, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19601357bf5b] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[16] name=[Lit_rate_demean] type=[LINEAR]
inla_parse_linear...
section[Lit_rate_demean]
dir=[fixed.effect00000013]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 0/51748 (idx,y) = (0, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 1/51748 (idx,y) = (1, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 2/51748 (idx,y) = (2, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 3/51748 (idx,y) = (3, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 4/51748 (idx,y) = (4, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 5/51748 (idx,y) = (5, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 6/51748 (idx,y) = (6, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 7/51748 (idx,y) = (7, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 8/51748 (idx,y) = (8, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 9/51748 (idx,y) = (9, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 10/51748 (idx,y) = (10, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 11/51748 (idx,y) = (11, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 12/51748 (idx,y) = (12, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 13/51748 (idx,y) = (13, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 14/51748 (idx,y) = (14, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 15/51748 (idx,y) = (15, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 16/51748 (idx,y) = (16, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 17/51748 (idx,y) = (17, 0.0439105)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 18/51748 (idx,y) = (18, 0.0439105)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file196065d3f948] 19/51748 (idx,y) = (19, 0.0439105)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[17] name=[Perc_branca_demean] type=[LINEAR]
inla_parse_linear...
section[Perc_branca_demean]
dir=[fixed.effect00000014]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 0/51748 (idx,y) = (0, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 1/51748 (idx,y) = (1, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 2/51748 (idx,y) = (2, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 3/51748 (idx,y) = (3, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 4/51748 (idx,y) = (4, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 5/51748 (idx,y) = (5, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 6/51748 (idx,y) = (6, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 7/51748 (idx,y) = (7, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 8/51748 (idx,y) = (8, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 9/51748 (idx,y) = (9, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 10/51748 (idx,y) = (10, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 11/51748 (idx,y) = (11, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 12/51748 (idx,y) = (12, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 13/51748 (idx,y) = (13, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 14/51748 (idx,y) = (14, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 15/51748 (idx,y) = (15, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 16/51748 (idx,y) = (16, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 17/51748 (idx,y) = (17, 0.00306269)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 18/51748 (idx,y) = (18, 0.00306269)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/data.files/file19603f931a32] 19/51748 (idx,y) = (19, 0.00306269)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
Index table: number of entries[18], total length[63938]
tag start-index length
Predictor 0 51748
bymID 51748 6088
bymID2 57836 3044
bymID3 60880 3044
(Intercept) 63924 1
year_int 63925 1
fix_2016 63926 1
log_inc_quant(6.95,7.3 63927 1
log_inc_quant(7.3,7.81 63928 1
log_inc_quant(7.81,9.99 63929 1
ICE_quant(-0.185,-0.0955 63930 1
ICE_quant(-0.0955,-0.00566 63931 1
ICE_quant(-0.00566,0.888 63932 1
log_LII_quant(-0.169,0.07 63933 1
log_LII_quant(0.07,0.337 63934 1
log_LII_quant(0.337,2.3 63935 1
Lit_rate_demean 63936 1
Perc_branca_demean 63937 1
parse section=[21] name=[INLA.Parameters] type=[INLA]
inla_parse_INLA...
section[INLA.Parameters]
lincomb.derived.only = [Yes]
lincomb.derived.correlation.matrix = [No]
global_node.factor = 2.000
global_node.degree = 2147483647
reordering = -1
Contents of ai_param 0x7ffd71d089a0
Optimiser: DEFAULT METHOD
Option for domin-BFGS: epsx = 0.005
Option for domin-BFGS: epsf = 1e-05 (rounding error)
Option for domin-BFGS: epsg = 0.005
Option for GSL-BFGS2: tol = 0.1
Option for GSL-BFGS2: step_size = 1
Option for GSL-BFGS2: epsx = 0.005
Option for GSL-BFGS2: epsf = 0.000353553
Option for GSL-BFGS2: epsg = 0.005
Restart: 0
Mode known: No
Gaussian approximation:
abserr_func = 0.0005
abserr_step = 0.0005
optpar_fp = 0
optpar_nr_step_factor = -0.1
Gaussian data: No
Strategy: Use a mean-skew corrected Gaussian by fitting a Skew-Normal
Fast mode: On
Use linear approximation to log(|Q +c|)? Yes
Method: Compute the derivative exact
Parameters for improved approximations
Number of points evaluate: 9
Step length to compute derivatives numerically: 0.000100002
Stencil to compute derivatives numerically: 5
Cutoff value to construct local neigborhood: 0.0001
Log calculations: On
Log calculated marginal for the hyperparameters: On
Integration strategy: Automatic (GRID for dim(theta)=1 and 2 and otherwise CCD)
f0 (CCD only): 1.100000
dz (GRID only): 0.750000
Adjust weights (GRID only): On
Difference in log-density limit (GRID only): 6.000000
Skip configurations with (presumed) small density (GRID only): On
Gradient is computed using Central difference with step-length 0.010000
Hessian is computed using Central difference with step-length 0.100000
Hessian matrix is forced to be a diagonal matrix? [No]
Compute effective number of parameters? [Yes]
Perform a Monte Carlo error-test? [No]
Interpolator [Auto]
CPO required diff in log-density [3]
Stupid search mode:
Status [On]
Max iter [1000]
Factor [1.05]
Numerical integration of hyperparameters:
Maximum number of function evaluations [100000]
Relative error ....................... [1e-05]
Absolute error ....................... [1e-06]
To stabilise the numerical optimisation:
Minimum value of the -Hessian [-inf]
CPO manual calculation[No]
Laplace-correction is Disabled.
inla_build: check for unused entries in[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/Model.ini]
inla_INLA...
Strategy = [DEFAULT]
Size is [63938]
Chose OpenMP-strategy [HUGE]
Chose density-strategy [LOW]
Size of graph=[63938] constraints=[3]
Found optimal reordering=[amdc] nnz(L)=[644596] and use_global_nodes(user)=[no]
List of hyperparameters:
theta[0] = [Log precision for bymID (idd component)]
theta[1] = [Log precision for bymID (spatial component)]
theta[2] = [Log precision for bymID2]
theta[3] = [Log precision for bymID3]
Optimise using DEFAULT METHOD
max.logdens= -36580.836069 fn= 1 theta= 4.010000 4.000000 4.000000 4.000000 range=[-3.585 6.740]
max.logdens= -36577.622804 fn= 2 theta= 3.990000 4.000000 4.000000 4.000000 range=[-3.585 6.739]
max.logdens= -36571.745673 fn= 4 theta= 4.000000 4.000000 4.010000 4.000000 range=[-3.574 6.739]
max.logdens= -35980.249497 fn= 9 theta= 3.790934 3.952448 4.976745 3.999755 range=[-2.736 6.669]
max.logdens= -35978.169721 fn= 11 theta= 3.780934 3.952448 4.976745 3.999755 range=[-2.737 6.668]
max.logdens= -35976.556149 fn= 13 theta= 3.790934 3.952448 4.986745 3.999755 range=[-2.729 6.668]
max.logdens= -35785.685153 fn= 18 theta= 3.581868 3.904895 5.953489 3.999511 range=[-2.159 6.510]
max.logdens= -35782.527355 fn= 20 theta= 3.571868 3.904895 5.953489 3.999511 range=[-2.160 6.510]
Iter=1 |grad|=318 |x-x.old|=1 |f-f.old|=794
max.logdens= -35404.804927 fn= 27 theta= 2.613044 3.721968 6.120573 3.999394 range=[-2.259 6.379]
max.logdens= -35400.166667 fn= 29 theta= 2.603044 3.721968 6.120573 3.999394 range=[-2.261 6.378]
max.logdens= -35112.972692 fn= 36 theta= -0.577925 3.119468 6.670890 3.999011 range=[-3.624 5.930]
max.logdens= -35112.276161 fn= 37 theta= -0.577925 3.119468 6.680890 3.999011 range=[-3.625 5.931]
max.logdens= -35106.734037 fn= 39 theta= -0.567925 3.119468 6.670890 3.999011 range=[-3.617 5.931]
max.logdens= -34733.392576 fn= 45 theta= 0.561834 3.334671 6.474327 3.999148 range=[-2.852 5.992]
max.logdens= -34732.865790 fn= 46 theta= 0.571834 3.334671 6.474327 3.999148 range=[-2.846 5.993]
max.logdens= -34732.315201 fn= 47 theta= 0.561834 3.334671 6.484327 3.999148 range=[-2.853 5.992]
max.logdens= -34731.294752 fn= 58 theta= 0.664395 3.354035 6.466639 3.999160 range=[-2.790 6.003]
Iter=2 |grad|=110 |x-x.old|=1.51 |f-f.old|=1.05e+03
max.logdens= -34713.643154 fn= 64 theta= 0.444216 3.301840 6.814869 3.999150 range=[-2.955 5.981]
max.logdens= -34712.962573 fn= 67 theta= 0.444216 3.301840 6.824869 3.999150 range=[-2.956 5.981]
max.logdens= -34712.514716 fn= 68 theta= 0.454216 3.301840 6.814869 3.999150 range=[-2.949 5.982]
Iter=3 |grad|=134 |x-x.old|=0.212 |f-f.old|=18.9
max.logdens= -34685.673587 fn= 73 theta= 0.569167 3.271310 7.153476 3.989097 range=[-2.904 5.986]
max.logdens= -34685.211826 fn= 74 theta= 0.569167 3.271310 7.163476 3.989097 range=[-2.904 5.986]
max.logdens= -34676.542136 fn= 83 theta= 0.751852 3.226673 7.648537 3.974400 range=[-2.825 5.982]
max.logdens= -34676.388861 fn= 84 theta= 0.751852 3.226673 7.658537 3.974400 range=[-2.826 5.982]
max.logdens= -34675.834703 fn= 86 theta= 0.741852 3.226673 7.648537 3.974400 range=[-2.831 5.982]
Iter=4 |grad|=75.8 |x-x.old|=0.446 |f-f.old|=37.1
max.logdens= -34673.063009 fn= 92 theta= 0.487143 3.109595 8.602990 3.902010 range=[-3.006 5.980]
max.logdens= -34673.062670 fn= 93 theta= 0.487143 3.109595 8.592990 3.902010 range=[-3.006 5.980]
max.logdens= -34672.342040 fn= 95 theta= 0.497143 3.109595 8.602990 3.902010 range=[-3.000 5.979]
max.logdens= -34668.560521 fn= 101 theta= 0.613266 3.165378 8.148231 3.936501 range=[-2.923 5.976]
max.logdens= -34668.325817 fn= 102 theta= 0.613266 3.165378 8.158231 3.936501 range=[-2.923 5.976]
max.logdens= -34668.319704 fn= 112 theta= 0.595955 3.157721 8.220649 3.931767 range=[-2.934 5.976]
max.logdens= -34668.281106 fn= 114 theta= 0.605955 3.157721 8.210649 3.931767 range=[-2.928 5.976]
Iter=5 |grad|=12.2 |x-x.old|=0.294 |f-f.old|=8.18
max.logdens= -34668.176289 fn= 121 theta= 0.609903 3.138202 8.305286 3.918058 range=[-2.929 5.975]
max.logdens= -34668.146875 fn= 122 theta= 0.609903 3.138202 8.315286 3.918058 range=[-2.929 5.975]
max.logdens= -34668.141979 fn= 127 theta= 0.609903 3.138202 8.305286 3.908058 range=[-2.929 5.975]
max.logdens= -34668.132314 fn= 129 theta= 0.609903 3.128202 8.305286 3.918058 range=[-2.929 5.975]
max.logdens= -34668.125159 fn= 138 theta= 0.614575 3.121663 8.336990 3.913466 range=[-2.927 5.975]
Iter=6 |grad|=5.31 |x-x.old|=0.0658 |f-f.old|=0.198 Reached numerical limit!
Number of function evaluations = 173
Compute the Hessian using central differences and step_size[0.1]. Matrix-type [dense]
max.logdens= -34667.780978 fn= 176 theta= 0.614575 3.031662 8.336991 3.913466 range=[-2.927 5.975]
Mode not sufficient accurate; switch to a stupid local search strategy.
max.logdens= -34667.762423 fn= 184 theta= 0.614575 3.031662 8.336991 3.808466 range=[-2.927 5.975]
max.logdens= -34667.374040 fn= 185 theta= 0.614575 2.926662 8.336991 3.913466 range=[-2.927 5.975]
max.logdens= -34667.354110 fn= 192 theta= 0.614575 2.926662 8.336991 3.803216 range=[-2.927 5.975]
max.logdens= -34666.941851 fn= 193 theta= 0.614575 2.816412 8.336991 3.913466 range=[-2.927 5.975]
max.logdens= -34666.487478 fn= 201 theta= 0.614575 2.700650 8.336991 3.913466 range=[-2.927 5.975]
max.logdens= -34666.015232 fn= 211 theta= 0.614575 2.579099 8.336991 3.913466 range=[-2.928 5.975]
max.logdens= -34665.533791 fn= 220 theta= 0.614575 2.451471 8.336991 3.913466 range=[-2.928 5.975]
max.logdens= -34665.507995 fn= 228 theta= 0.614575 2.451471 8.336991 3.779456 range=[-2.928 5.976]
max.logdens= -34665.055498 fn= 231 theta= 0.614575 2.317461 8.336991 3.913466 range=[-2.930 5.976]
max.logdens= -34664.599059 fn= 237 theta= 0.614575 2.176751 8.336991 3.913466 range=[-2.931 5.976]
max.logdens= -34664.193136 fn= 246 theta= 0.614575 2.029006 8.336991 3.913466 range=[-2.933 5.976]
max.logdens= -34663.878961 fn= 256 theta= 0.614575 1.873873 8.336991 3.913466 range=[-2.936 5.976]
max.logdens= -34663.845341 fn= 264 theta= 0.614575 1.873873 8.336991 3.750576 range=[-2.936 5.977]
max.logdens= -34663.494073 fn= 267 theta= 0.614575 1.710984 8.336991 3.913466 range=[-2.946 5.977]
max.logdens= -34663.487614 fn= 274 theta= 0.614575 1.539950 8.336991 3.913466 range=[-2.958 5.977]
max.logdens= -34663.457692 fn= 275 theta= 0.614575 1.710984 8.336991 3.742432 range=[-2.946 5.977]
max.logdens= -34663.389179 fn= 284 theta= 0.614575 1.710984 8.336991 3.562846 range=[-2.946 5.977]
max.logdens= -34663.281276 fn= 293 theta= 0.614575 1.710984 8.336991 3.374281 range=[-2.946 5.978]
max.logdens= -34663.127657 fn= 300 theta= 0.614575 1.710984 8.336991 3.176288 range=[-2.946 5.979]
max.logdens= -34662.923401 fn= 309 theta= 0.614575 1.710984 8.336991 2.968395 range=[-2.946 5.979]
max.logdens= -34662.668472 fn= 320 theta= 0.614575 1.710984 8.336991 2.750108 range=[-2.946 5.980]
max.logdens= -34662.374003 fn= 327 theta= 0.614575 1.710984 8.336991 2.520906 range=[-2.946 5.981]
max.logdens= -34662.073499 fn= 336 theta= 0.614575 1.710984 8.336991 2.280244 range=[-2.945 5.983]
max.logdens= -34661.844234 fn= 348 theta= 0.614575 1.710984 8.336991 2.027549 range=[-2.945 5.984]
562.810995 38.523252 14.790554 0.304746
38.523252 8.633775 0.514147 0.150940
14.790554 0.514147 13.075243 0.227020
0.304746 0.150940 0.227020 2.135465
Eigenvectors of the Hessian
0.997260 0.021470 -0.070745 0.002561
0.068968 0.076241 0.994029 -0.036556
0.026747 -0.996664 0.073762 -0.022457
0.000568 -0.019668 0.038211 0.999076
Eigenvalues of the Hessian
565.872024
12.721783
5.936050
2.125621
StDev/Correlation matrix (scaled inverse Hessian)
0.051380 -0.553477 -0.175687 0.020334
0.409329 0.058742 -0.038852
0.281490 -0.044257
0.685462
max.logdens= -34661.572096 fn= 570 theta= 0.698421 1.716782 8.339240 2.241582 range=[-2.909 5.979]
Compute corrected stdev for theta[0]: negative 0.658376 positive 1.000000
Compute corrected stdev for theta[1]: negative 1.044949 positive 0.963085
Compute corrected stdev for theta[2]: negative 1.729220 positive 0.710281
Compute corrected stdev for theta[3]: negative 0.568366 positive 1.221696
config 0/25=[ 0.00 -0.00 0.00 2.69] log(rel.dens)=-1.29, [1] accept, compute, 1677.30s
config 1/25=[ 1.10 -1.15 0.78 1.34] log(rel.dens)=-1.89, [3] accept, compute, 1681.12s
config 2/25=[ 0.00 0.00 0.00 0.00] log(rel.dens)=-0.08, [0] accept, compute, 1682.40s
config 3/25=[ -0.72 1.06 -1.90 1.34] log(rel.dens)=-3.57, [2] accept, compute, 1686.14s
config 4/25=[ -0.00 -0.00 0.00 -1.25] log(rel.dens)=-0.86, [1] accept, compute, 1591.33s
config 5/25=[ 2.20 -0.00 -0.00 0.00] log(rel.dens)= 0.27, [0] accept, compute, 1590.60s
config 6/25=[ -0.72 1.06 -1.90 -0.63] log(rel.dens)=-1.80, [2] accept, compute, 1573.51s
config 7/25=[ 1.10 -1.15 0.78 -0.63] log(rel.dens)=-0.76, [3] accept, compute, 1590.47s
config 8/25=[ -0.72 -1.15 -1.90 1.34] log(rel.dens)=-3.92, [1] accept, compute, 934.53s
config 9/25=[ -0.72 1.06 0.78 1.34] log(rel.dens)=-3.81, [2] accept, compute, 932.54s
config 10/25=[ -1.45 -0.00 0.00 0.00] log(rel.dens)=-3.22, [0] accept, compute, 935.71s
config 11/25=[ 1.10 1.06 -1.90 1.34] log(rel.dens)=-1.10, [3] accept, compute, 934.37s
max.logdens= -34661.555085 fn= 592 theta= 0.721201 0.976437 7.994243 1.777460 range=[-2.999 5.988]
config 12/25=[ -0.72 -1.15 -1.90 -0.63] log(rel.dens)=-2.30, [1] accept, compute, 1114.28s
config 13/25=[ 0.00 2.12 0.00 0.00] log(rel.dens)=-2.53, [0] accept, compute, 1113.38s
config 14/25=[ -0.72 1.06 0.78 -0.63] log(rel.dens)=-2.68, [2] accept, compute, 1118.18s
config 15/25=[ 1.10 1.06 -1.90 -0.63] log(rel.dens)= 0.47, [3] accept, compute, 1116.79s
config 16/25=[ -0.72 -1.15 0.78 1.34] log(rel.dens)=-4.19, [1] accept, compute, 1095.46s
config 17/25=[ 0.00 -2.30 0.00 -0.00] log(rel.dens)=-2.24, [0] accept, compute, 1097.62s
config 18/25=[ 1.10 -1.15 -1.90 1.34] log(rel.dens)=-1.39, [2] accept, compute, 1094.70s
config 19/25=[ 1.10 1.06 0.78 1.34] log(rel.dens)=-1.63, [3] accept, compute, 1096.54s
config 20/25=[ -0.00 0.00 1.56 0.00] log(rel.dens)=-2.96, [0] accept, compute, 1066.93s
config 21/25=[ -0.72 -1.15 0.78 -0.63] log(rel.dens)=-3.15, [1] accept, compute, 1067.76s
config 22/25=[ 1.10 -1.15 -1.90 -0.63] log(rel.dens)= 0.16, [2] accept, compute, 1066.98s
config 23/25=[ 1.10 1.06 0.78 -0.63] log(rel.dens)=-0.46, [3] accept, compute, 1063.83s
config 24/25=[ 0.00 -0.00 -3.80 -0.00] log(rel.dens)=-12.89, [0] accept, compute, 390.97s
Combine the densities with relative weights:
config 0/25=[ 0.00 0.00 0.00 0.00] weight = 0.256 neff = 2221.01
config 1/25=[ 2.20 -0.00 -0.00 0.00] weight = 0.815 neff = 2179.21
config 2/25=[ -1.45 -0.00 0.00 0.00] weight = 0.025 neff = 2248.26
config 3/25=[ 0.00 2.12 0.00 0.00] weight = 0.050 neff = 2285.99
config 4/25=[ 0.00 -2.30 0.00 -0.00] weight = 0.066 neff = 2181.82
config 5/25=[ -0.00 0.00 1.56 0.00] weight = 0.032 neff = 2223.35
config 6/25=[ 0.00 -0.00 -3.80 -0.00] weight = 0.000 neff = 2271.87
config 7/25=[ 0.00 -0.00 0.00 2.69] weight = 0.171 neff = 2148.45
config 8/25=[ -0.00 -0.00 0.00 -1.25] weight = 0.264 neff = 2325.26
config 9/25=[ -0.72 -1.15 -1.90 1.34] weight = 0.012 neff = 2169.42
config 10/25=[ -0.72 -1.15 -1.90 -0.63] weight = 0.062 neff = 2265.55
config 11/25=[ -0.72 -1.15 0.78 1.34] weight = 0.009 neff = 2161.00
config 12/25=[ -0.72 -1.15 0.78 -0.63] weight = 0.027 neff = 2255.41
config 13/25=[ -0.72 1.06 -1.90 1.34] weight = 0.017 neff = 2223.05
config 14/25=[ -0.72 1.06 -1.90 -0.63] weight = 0.102 neff = 2318.23
config 15/25=[ -0.72 1.06 0.78 1.34] weight = 0.014 neff = 2211.52
config 16/25=[ -0.72 1.06 0.78 -0.63] weight = 0.043 neff = 2305.08
config 17/25=[ 1.10 -1.15 -1.90 1.34] weight = 0.155 neff = 2136.88
config 18/25=[ 1.10 -1.15 -1.90 -0.63] weight = 0.730 neff = 2232.87
config 19/25=[ 1.10 -1.15 0.78 1.34] weight = 0.094 neff = 2125.92
config 20/25=[ 1.10 -1.15 0.78 -0.63] weight = 0.290 neff = 2220.28
config 21/25=[ 1.10 1.06 -1.90 1.34] weight = 0.206 neff = 2191.03
config 22/25=[ 1.10 1.06 -1.90 -0.63] weight = 1.000 neff = 2286.13
config 23/25=[ 1.10 1.06 0.78 1.34] weight = 0.122 neff = 2177.11
config 24/25=[ 1.10 1.06 0.78 -0.63] weight = 0.391 neff = 2270.61
Done.
Expected effective number of parameters: 2232.669(53.195), eqv.#replicates: 23.178
DIC:
Mean of Deviance................. 64649.6
Deviance at Mean................. 62467
Effective number of parameters... 2182.58
DIC.............................. 66832.1
Marginal likelihood: Integration -34663.776870 Gaussian-approx -34664.062270
Compute the marginal for each of the 4 hyperparameters
Interpolation method: Auto
Compute the marginal for theta[0] to theta[3] using numerical integration...
Compute the marginal for theta[0] to theta[3] using numerical integration... Done.
Compute the marginal for the hyperparameters... done.
Store results in directory[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/results.files]
Wall-clock time used on [/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960368ceb7/Model.ini]
Preparations : 0.125 seconds
Approx inference: 8256.514 seconds [0.1|0.0|4.1|95.7|0.2]%
Output : 4.564 seconds
---------------------------------
Total : 8261.204 seconds
formula_only_covar <- y ~ 1 + log_inc_quant + ICE_quant + log_LII_quant + Lit_rate_demean + Perc_branca_demean
model_only_covar<- inla(formula_only_covar, family="poisson", data=BYM_data_covar, E=E, verbose=TRUE, control.compute=list(dic=TRUE), control.predictor=list(compute=TRUE))
hgid: 29c6a7f1b1ff date: Thu Jun 15 19:50:23 2017 +0800
Report bugs to <help@r-inla.org>
Processing file [/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/Model.ini] max_threads=[4]
inla_build...
number of sections=[18]
parse section=[0] name=[INLA.libR] type=[LIBR]
inla_parse_libR...
section[INLA.libR]
R_HOME=[/Library/Frameworks/R.framework/Resources]
parse section=[17] name=[INLA.Expert] type=[EXPERT]
inla_parse_expert...
section[INLA.Expert]
disable.gaussian.check=[0]
cpo.manual=[0]
jp.Rfile=[(null)]
jp.RData=NULL
jp.func=[(null)]
parse section=[1] name=[INLA.Model] type=[PROBLEM]
inla_parse_problem...
name=[INLA.Model]
openmp.strategy=[default]
store results in directory=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/results.files]
output:
cpo=[0]
po=[0]
dic=[1]
kld=[1]
mlik=[1]
q=[0]
graph=[0]
gdensity=[0]
hyperparameters=[1]
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[3] name=[Predictor] type=[PREDICTOR]
inla_parse_predictor ...
section=[Predictor]
dir=[predictor]
PRIOR->name=[loggamma]
hyperid=[53001|Predictor]
PRIOR->from_theta=[function (x) <<NEWLINE>>exp(x)]
PRIOR->to_theta = [function (x) <<NEWLINE>>log(x)]
PRIOR->PARAMETERS=[1, 1e-05]
initialise log_precision[12]
fixed=[1]
user.scale=[1]
n=[51748]
m=[0]
ndata=[51748]
compute=[1]
read offsets from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196053ad8d7e] 19/51748 (idx,y) = (19, 0)
Aext=[(null)]
AextPrecision=[1e+08]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[2] name=[INLA.Data1] type=[DATA]
inla_parse_data [section 1]...
tag=[INLA.Data1]
family=[POISSON]
likelihood=[POISSON]
file->name=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604de7586a]
file->name=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960f5dbf1b]
read n=[155244] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604de7586a]
0/51748 (idx,a,y,d) = (0, 0.872178, 0, 1)
1/51748 (idx,a,y,d) = (1, 0.872178, 1, 1)
2/51748 (idx,a,y,d) = (2, 0.872178, 0, 1)
3/51748 (idx,a,y,d) = (3, 0.872178, 0, 1)
4/51748 (idx,a,y,d) = (4, 0.872178, 0, 1)
5/51748 (idx,a,y,d) = (5, 0.872178, 1, 1)
6/51748 (idx,a,y,d) = (6, 0.872178, 1, 1)
7/51748 (idx,a,y,d) = (7, 0.872178, 0, 1)
8/51748 (idx,a,y,d) = (8, 0.872178, 0, 1)
9/51748 (idx,a,y,d) = (9, 0.872178, 1, 1)
10/51748 (idx,a,y,d) = (10, 0.872178, 0, 1)
11/51748 (idx,a,y,d) = (11, 0.872178, 1, 1)
12/51748 (idx,a,y,d) = (12, 0.872178, 1, 1)
13/51748 (idx,a,y,d) = (13, 0.872178, 5, 1)
14/51748 (idx,a,y,d) = (14, 0.872178, 1, 1)
15/51748 (idx,a,y,d) = (15, 0.872178, 0, 1)
16/51748 (idx,a,y,d) = (16, 0.872178, 0, 1)
17/51748 (idx,a,y,d) = (17, 0.287131, 0, 1)
18/51748 (idx,a,y,d) = (18, 0.287131, 0, 1)
19/51748 (idx,a,y,d) = (19, 0.287131, 0, 1)
likelihood.variant=[0]
Link model [LOG]
Link order [-1]
Link variant [-1]
Link ntheta [0]
mix.use[0]
section=[4] name=[(Intercept)] type=[LINEAR]
inla_parse_linear...
section[(Intercept)]
dir=[fixed.effect00000001]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 0/51748 (idx,y) = (0, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 1/51748 (idx,y) = (1, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 2/51748 (idx,y) = (2, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 3/51748 (idx,y) = (3, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 4/51748 (idx,y) = (4, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 5/51748 (idx,y) = (5, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 6/51748 (idx,y) = (6, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 7/51748 (idx,y) = (7, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 8/51748 (idx,y) = (8, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 9/51748 (idx,y) = (9, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 10/51748 (idx,y) = (10, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 11/51748 (idx,y) = (11, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 12/51748 (idx,y) = (12, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 13/51748 (idx,y) = (13, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 14/51748 (idx,y) = (14, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 15/51748 (idx,y) = (15, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 16/51748 (idx,y) = (16, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602724761d] 19/51748 (idx,y) = (19, 1)
prior mean=[0]
prior precision=[0]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[5] name=[log_inc_quant(6.95,7.3] type=[LINEAR]
inla_parse_linear...
section[log_inc_quant(6.95,7.3]
dir=[fixed.effect00000002]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19604ac67dfe] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[6] name=[log_inc_quant(7.3,7.81] type=[LINEAR]
inla_parse_linear...
section[log_inc_quant(7.3,7.81]
dir=[fixed.effect00000003]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602d79d50c] 19/51748 (idx,y) = (19, 1)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[7] name=[log_inc_quant(7.81,9.99] type=[LINEAR]
inla_parse_linear...
section[log_inc_quant(7.81,9.99]
dir=[fixed.effect00000004]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196019921e27] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[8] name=[ICE_quant(-0.185,-0.0955] type=[LINEAR]
inla_parse_linear...
section[ICE_quant(-0.185,-0.0955]
dir=[fixed.effect00000005]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196047f99f8e] 19/51748 (idx,y) = (19, 1)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[9] name=[ICE_quant(-0.0955,-0.00566] type=[LINEAR]
inla_parse_linear...
section[ICE_quant(-0.0955,-0.00566]
dir=[fixed.effect00000006]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file1960555a488c] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[10] name=[ICE_quant(-0.00566,0.888] type=[LINEAR]
inla_parse_linear...
section[ICE_quant(-0.00566,0.888]
dir=[fixed.effect00000007]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601a510b1b] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[11] name=[log_LII_quant(-0.169,0.07] type=[LINEAR]
inla_parse_linear...
section[log_LII_quant(-0.169,0.07]
dir=[fixed.effect00000008]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19603eb0271c] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[12] name=[log_LII_quant(0.07,0.337] type=[LINEAR]
inla_parse_linear...
section[log_LII_quant(0.07,0.337]
dir=[fixed.effect00000009]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19601ed7bf6b] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[13] name=[log_LII_quant(0.337,2.3] type=[LINEAR]
inla_parse_linear...
section[log_LII_quant(0.337,2.3]
dir=[fixed.effect00000010]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 0/51748 (idx,y) = (0, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 1/51748 (idx,y) = (1, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 2/51748 (idx,y) = (2, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 3/51748 (idx,y) = (3, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 4/51748 (idx,y) = (4, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 5/51748 (idx,y) = (5, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 6/51748 (idx,y) = (6, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 7/51748 (idx,y) = (7, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 8/51748 (idx,y) = (8, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 9/51748 (idx,y) = (9, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 10/51748 (idx,y) = (10, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 11/51748 (idx,y) = (11, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 12/51748 (idx,y) = (12, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 13/51748 (idx,y) = (13, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 14/51748 (idx,y) = (14, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 15/51748 (idx,y) = (15, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 16/51748 (idx,y) = (16, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19606658199e] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[14] name=[Lit_rate_demean] type=[LINEAR]
inla_parse_linear...
section[Lit_rate_demean]
dir=[fixed.effect00000011]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 0/51748 (idx,y) = (0, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 1/51748 (idx,y) = (1, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 2/51748 (idx,y) = (2, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 3/51748 (idx,y) = (3, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 4/51748 (idx,y) = (4, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 5/51748 (idx,y) = (5, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 6/51748 (idx,y) = (6, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 7/51748 (idx,y) = (7, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 8/51748 (idx,y) = (8, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 9/51748 (idx,y) = (9, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 10/51748 (idx,y) = (10, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 11/51748 (idx,y) = (11, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 12/51748 (idx,y) = (12, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 13/51748 (idx,y) = (13, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 14/51748 (idx,y) = (14, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 15/51748 (idx,y) = (15, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 16/51748 (idx,y) = (16, -0.057515)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 17/51748 (idx,y) = (17, 0.0439105)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 18/51748 (idx,y) = (18, 0.0439105)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file196021fa0890] 19/51748 (idx,y) = (19, 0.0439105)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[15] name=[Perc_branca_demean] type=[LINEAR]
inla_parse_linear...
section[Perc_branca_demean]
dir=[fixed.effect00000012]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 0/51748 (idx,y) = (0, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 1/51748 (idx,y) = (1, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 2/51748 (idx,y) = (2, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 3/51748 (idx,y) = (3, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 4/51748 (idx,y) = (4, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 5/51748 (idx,y) = (5, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 6/51748 (idx,y) = (6, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 7/51748 (idx,y) = (7, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 8/51748 (idx,y) = (8, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 9/51748 (idx,y) = (9, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 10/51748 (idx,y) = (10, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 11/51748 (idx,y) = (11, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 12/51748 (idx,y) = (12, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 13/51748 (idx,y) = (13, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 14/51748 (idx,y) = (14, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 15/51748 (idx,y) = (15, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 16/51748 (idx,y) = (16, -0.129052)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 17/51748 (idx,y) = (17, 0.00306269)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 18/51748 (idx,y) = (18, 0.00306269)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/data.files/file19602648375d] 19/51748 (idx,y) = (19, 0.00306269)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
Index table: number of entries[13], total length[51760]
tag start-index length
Predictor 0 51748
(Intercept) 51748 1
log_inc_quant(6.95,7.3 51749 1
log_inc_quant(7.3,7.81 51750 1
log_inc_quant(7.81,9.99 51751 1
ICE_quant(-0.185,-0.0955 51752 1
ICE_quant(-0.0955,-0.00566 51753 1
ICE_quant(-0.00566,0.888 51754 1
log_LII_quant(-0.169,0.07 51755 1
log_LII_quant(0.07,0.337 51756 1
log_LII_quant(0.337,2.3 51757 1
Lit_rate_demean 51758 1
Perc_branca_demean 51759 1
parse section=[16] name=[INLA.Parameters] type=[INLA]
inla_parse_INLA...
section[INLA.Parameters]
lincomb.derived.only = [Yes]
lincomb.derived.correlation.matrix = [No]
global_node.factor = 2.000
global_node.degree = 2147483647
reordering = -1
Contents of ai_param 0x7fe0714197e0
Optimiser: DEFAULT METHOD
Option for domin-BFGS: epsx = 0.005
Option for domin-BFGS: epsf = 1e-05 (rounding error)
Option for domin-BFGS: epsg = 0.005
Option for GSL-BFGS2: tol = 0.1
Option for GSL-BFGS2: step_size = 1
Option for GSL-BFGS2: epsx = 0.005
Option for GSL-BFGS2: epsf = 0.000353553
Option for GSL-BFGS2: epsg = 0.005
Restart: 0
Mode known: No
Gaussian approximation:
abserr_func = 0.0005
abserr_step = 0.0005
optpar_fp = 0
optpar_nr_step_factor = -0.1
Gaussian data: No
Strategy: Use a mean-skew corrected Gaussian by fitting a Skew-Normal
Fast mode: On
Use linear approximation to log(|Q +c|)? Yes
Method: Compute the derivative exact
Parameters for improved approximations
Number of points evaluate: 9
Step length to compute derivatives numerically: 0.000100002
Stencil to compute derivatives numerically: 5
Cutoff value to construct local neigborhood: 0.0001
Log calculations: On
Log calculated marginal for the hyperparameters: On
Integration strategy: Automatic (GRID for dim(theta)=1 and 2 and otherwise CCD)
f0 (CCD only): 1.100000
dz (GRID only): 0.750000
Adjust weights (GRID only): On
Difference in log-density limit (GRID only): 6.000000
Skip configurations with (presumed) small density (GRID only): On
Gradient is computed using Central difference with step-length 0.010000
Hessian is computed using Central difference with step-length 0.100000
Hessian matrix is forced to be a diagonal matrix? [No]
Compute effective number of parameters? [Yes]
Perform a Monte Carlo error-test? [No]
Interpolator [Auto]
CPO required diff in log-density [3]
Stupid search mode:
Status [On]
Max iter [1000]
Factor [1.05]
Numerical integration of hyperparameters:
Maximum number of function evaluations [100000]
Relative error ....................... [1e-05]
Absolute error ....................... [1e-06]
To stabilise the numerical optimisation:
Minimum value of the -Hessian [-inf]
CPO manual calculation[No]
Laplace-correction is Disabled.
inla_build: check for unused entries in[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/Model.ini]
inla_INLA...
Strategy = [DEFAULT]
Size is [51760]
Chose OpenMP-strategy [HUGE]
Chose density-strategy [LOW]
Size of graph=[51760] constraints=[0]
Found optimal reordering=[amdc] nnz(L)=[323503] and use_global_nodes(user)=[no]
None hyperparameters
Combine the densities with relative weights:
config 0/ 1=[] weight = 1.000 adjusted weight = 1.000 neff = 12.11
Done.
Expected effective number of parameters: 12.115(0.000), eqv.#replicates: 4271.424
DIC:
Mean of Deviance................. 84310.9
Deviance at Mean................. 84298.8
Effective number of parameters... 12.1134
DIC.............................. 84323
Store results in directory[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/results.files]
Wall-clock time used on [/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19604726f234/Model.ini]
Preparations : 0.095 seconds
Approx inference: 98.756 seconds [3.1|0.0|0.0|95.5|1.4]%
Output : 7.197 seconds
---------------------------------
Total : 106.048 seconds
formula_only_covar3 <- y ~ 1 + log_inc_quant + log_LII_quant
model_only_covar3 <- inla(formula_only_covar3, family="poisson", data=BYM_data_covar, E=E, verbose=TRUE, control.compute=list(dic=TRUE), control.predictor=list(compute=TRUE))
hgid: 29c6a7f1b1ff date: Thu Jun 15 19:50:23 2017 +0800
Report bugs to <help@r-inla.org>
Processing file [/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/Model.ini] max_threads=[4]
inla_build...
number of sections=[13]
parse section=[0] name=[INLA.libR] type=[LIBR]
inla_parse_libR...
section[INLA.libR]
R_HOME=[/Library/Frameworks/R.framework/Resources]
parse section=[12] name=[INLA.Expert] type=[EXPERT]
inla_parse_expert...
section[INLA.Expert]
disable.gaussian.check=[0]
cpo.manual=[0]
jp.Rfile=[(null)]
jp.RData=NULL
jp.func=[(null)]
parse section=[1] name=[INLA.Model] type=[PROBLEM]
inla_parse_problem...
name=[INLA.Model]
openmp.strategy=[default]
store results in directory=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/results.files]
output:
cpo=[0]
po=[0]
dic=[1]
kld=[1]
mlik=[1]
q=[0]
graph=[0]
gdensity=[0]
hyperparameters=[1]
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[3] name=[Predictor] type=[PREDICTOR]
inla_parse_predictor ...
section=[Predictor]
dir=[predictor]
PRIOR->name=[loggamma]
hyperid=[53001|Predictor]
PRIOR->from_theta=[function (x) <<NEWLINE>>exp(x)]
PRIOR->to_theta = [function (x) <<NEWLINE>>log(x)]
PRIOR->PARAMETERS=[1, 1e-05]
initialise log_precision[12]
fixed=[1]
user.scale=[1]
n=[51748]
m=[0]
ndata=[51748]
compute=[1]
read offsets from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196015596e13] 19/51748 (idx,y) = (19, 0)
Aext=[(null)]
AextPrecision=[1e+08]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[2] name=[INLA.Data1] type=[DATA]
inla_parse_data [section 1]...
tag=[INLA.Data1]
family=[POISSON]
likelihood=[POISSON]
file->name=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196014283f3a]
file->name=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605e4f032c]
read n=[155244] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196014283f3a]
0/51748 (idx,a,y,d) = (0, 0.872178, 0, 1)
1/51748 (idx,a,y,d) = (1, 0.872178, 1, 1)
2/51748 (idx,a,y,d) = (2, 0.872178, 0, 1)
3/51748 (idx,a,y,d) = (3, 0.872178, 0, 1)
4/51748 (idx,a,y,d) = (4, 0.872178, 0, 1)
5/51748 (idx,a,y,d) = (5, 0.872178, 1, 1)
6/51748 (idx,a,y,d) = (6, 0.872178, 1, 1)
7/51748 (idx,a,y,d) = (7, 0.872178, 0, 1)
8/51748 (idx,a,y,d) = (8, 0.872178, 0, 1)
9/51748 (idx,a,y,d) = (9, 0.872178, 1, 1)
10/51748 (idx,a,y,d) = (10, 0.872178, 0, 1)
11/51748 (idx,a,y,d) = (11, 0.872178, 1, 1)
12/51748 (idx,a,y,d) = (12, 0.872178, 1, 1)
13/51748 (idx,a,y,d) = (13, 0.872178, 5, 1)
14/51748 (idx,a,y,d) = (14, 0.872178, 1, 1)
15/51748 (idx,a,y,d) = (15, 0.872178, 0, 1)
16/51748 (idx,a,y,d) = (16, 0.872178, 0, 1)
17/51748 (idx,a,y,d) = (17, 0.287131, 0, 1)
18/51748 (idx,a,y,d) = (18, 0.287131, 0, 1)
19/51748 (idx,a,y,d) = (19, 0.287131, 0, 1)
likelihood.variant=[0]
Link model [LOG]
Link order [-1]
Link variant [-1]
Link ntheta [0]
mix.use[0]
section=[4] name=[(Intercept)] type=[LINEAR]
inla_parse_linear...
section[(Intercept)]
dir=[fixed.effect00000001]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 0/51748 (idx,y) = (0, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 1/51748 (idx,y) = (1, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 2/51748 (idx,y) = (2, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 3/51748 (idx,y) = (3, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 4/51748 (idx,y) = (4, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 5/51748 (idx,y) = (5, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 6/51748 (idx,y) = (6, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 7/51748 (idx,y) = (7, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 8/51748 (idx,y) = (8, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 9/51748 (idx,y) = (9, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 10/51748 (idx,y) = (10, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 11/51748 (idx,y) = (11, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 12/51748 (idx,y) = (12, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 13/51748 (idx,y) = (13, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 14/51748 (idx,y) = (14, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 15/51748 (idx,y) = (15, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 16/51748 (idx,y) = (16, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602249ac58] 19/51748 (idx,y) = (19, 1)
prior mean=[0]
prior precision=[0]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[5] name=[log_inc_quant(6.95,7.3] type=[LINEAR]
inla_parse_linear...
section[log_inc_quant(6.95,7.3]
dir=[fixed.effect00000002]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196012d1d6fe] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[6] name=[log_inc_quant(7.3,7.81] type=[LINEAR]
inla_parse_linear...
section[log_inc_quant(7.3,7.81]
dir=[fixed.effect00000003]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file1960e79c759] 19/51748 (idx,y) = (19, 1)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[7] name=[log_inc_quant(7.81,9.99] type=[LINEAR]
inla_parse_linear...
section[log_inc_quant(7.81,9.99]
dir=[fixed.effect00000004]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19605d0eab7b] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[8] name=[log_LII_quant(-0.169,0.07] type=[LINEAR]
inla_parse_linear...
section[log_LII_quant(-0.169,0.07]
dir=[fixed.effect00000005]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19606e1c47f7] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[9] name=[log_LII_quant(0.07,0.337] type=[LINEAR]
inla_parse_linear...
section[log_LII_quant(0.07,0.337]
dir=[fixed.effect00000006]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file19602b8e19b] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[10] name=[log_LII_quant(0.337,2.3] type=[LINEAR]
inla_parse_linear...
section[log_LII_quant(0.337,2.3]
dir=[fixed.effect00000007]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 0/51748 (idx,y) = (0, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 1/51748 (idx,y) = (1, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 2/51748 (idx,y) = (2, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 3/51748 (idx,y) = (3, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 4/51748 (idx,y) = (4, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 5/51748 (idx,y) = (5, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 6/51748 (idx,y) = (6, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 7/51748 (idx,y) = (7, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 8/51748 (idx,y) = (8, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 9/51748 (idx,y) = (9, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 10/51748 (idx,y) = (10, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 11/51748 (idx,y) = (11, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 12/51748 (idx,y) = (12, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 13/51748 (idx,y) = (13, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 14/51748 (idx,y) = (14, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 15/51748 (idx,y) = (15, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 16/51748 (idx,y) = (16, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/data.files/file196037e38882] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
Index table: number of entries[8], total length[51755]
tag start-index length
Predictor 0 51748
(Intercept) 51748 1
log_inc_quant(6.95,7.3 51749 1
log_inc_quant(7.3,7.81 51750 1
log_inc_quant(7.81,9.99 51751 1
log_LII_quant(-0.169,0.07 51752 1
log_LII_quant(0.07,0.337 51753 1
log_LII_quant(0.337,2.3 51754 1
parse section=[11] name=[INLA.Parameters] type=[INLA]
inla_parse_INLA...
section[INLA.Parameters]
lincomb.derived.only = [Yes]
lincomb.derived.correlation.matrix = [No]
global_node.factor = 2.000
global_node.degree = 2147483647
reordering = -1
Contents of ai_param 0x7f93c850f050
Optimiser: DEFAULT METHOD
Option for domin-BFGS: epsx = 0.005
Option for domin-BFGS: epsf = 1e-05 (rounding error)
Option for domin-BFGS: epsg = 0.005
Option for GSL-BFGS2: tol = 0.1
Option for GSL-BFGS2: step_size = 1
Option for GSL-BFGS2: epsx = 0.005
Option for GSL-BFGS2: epsf = 0.000353553
Option for GSL-BFGS2: epsg = 0.005
Restart: 0
Mode known: No
Gaussian approximation:
abserr_func = 0.0005
abserr_step = 0.0005
optpar_fp = 0
optpar_nr_step_factor = -0.1
Gaussian data: No
Strategy: Use a mean-skew corrected Gaussian by fitting a Skew-Normal
Fast mode: On
Use linear approximation to log(|Q +c|)? Yes
Method: Compute the derivative exact
Parameters for improved approximations
Number of points evaluate: 9
Step length to compute derivatives numerically: 0.000100002
Stencil to compute derivatives numerically: 5
Cutoff value to construct local neigborhood: 0.0001
Log calculations: On
Log calculated marginal for the hyperparameters: On
Integration strategy: Automatic (GRID for dim(theta)=1 and 2 and otherwise CCD)
f0 (CCD only): 1.100000
dz (GRID only): 0.750000
Adjust weights (GRID only): On
Difference in log-density limit (GRID only): 6.000000
Skip configurations with (presumed) small density (GRID only): On
Gradient is computed using Central difference with step-length 0.010000
Hessian is computed using Central difference with step-length 0.100000
Hessian matrix is forced to be a diagonal matrix? [No]
Compute effective number of parameters? [Yes]
Perform a Monte Carlo error-test? [No]
Interpolator [Auto]
CPO required diff in log-density [3]
Stupid search mode:
Status [On]
Max iter [1000]
Factor [1.05]
Numerical integration of hyperparameters:
Maximum number of function evaluations [100000]
Relative error ....................... [1e-05]
Absolute error ....................... [1e-06]
To stabilise the numerical optimisation:
Minimum value of the -Hessian [-inf]
CPO manual calculation[No]
Laplace-correction is Disabled.
inla_build: check for unused entries in[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/Model.ini]
inla_INLA...
Strategy = [DEFAULT]
Size is [51755]
Chose OpenMP-strategy [HUGE]
Chose density-strategy [LOW]
Size of graph=[51755] constraints=[0]
Found optimal reordering=[amdc] nnz(L)=[181146] and use_global_nodes(user)=[no]
None hyperparameters
Combine the densities with relative weights:
config 0/ 1=[] weight = 1.000 adjusted weight = 1.000 neff = 7.11
Done.
Expected effective number of parameters: 7.115(0.000), eqv.#replicates: 7273.099
DIC:
Mean of Deviance................. 84666.6
Deviance at Mean................. 84659.5
Effective number of parameters... 7.11422
DIC.............................. 84673.7
Store results in directory[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/results.files]
Wall-clock time used on [/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file1960627f1/Model.ini]
Preparations : 0.097 seconds
Approx inference: 62.691 seconds [2.8|0.0|0.0|95.7|1.4]%
Output : 3.719 seconds
---------------------------------
Total : 66.507 seconds
formula_only_covar4 <- y ~ 1 + ICE_quant
model_only_covar4 <- inla(formula_only_covar4, family="poisson", data=BYM_data_covar, E=E, verbose=TRUE, control.compute=list(dic=TRUE), control.predictor=list(compute=TRUE))
hgid: 29c6a7f1b1ff date: Thu Jun 15 19:50:23 2017 +0800
Report bugs to <help@r-inla.org>
Processing file [/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/Model.ini] max_threads=[4]
inla_build...
number of sections=[10]
parse section=[0] name=[INLA.libR] type=[LIBR]
inla_parse_libR...
section[INLA.libR]
R_HOME=[/Library/Frameworks/R.framework/Resources]
parse section=[9] name=[INLA.Expert] type=[EXPERT]
inla_parse_expert...
section[INLA.Expert]
disable.gaussian.check=[0]
cpo.manual=[0]
jp.Rfile=[(null)]
jp.RData=NULL
jp.func=[(null)]
parse section=[1] name=[INLA.Model] type=[PROBLEM]
inla_parse_problem...
name=[INLA.Model]
openmp.strategy=[default]
store results in directory=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/results.files]
output:
cpo=[0]
po=[0]
dic=[1]
kld=[1]
mlik=[1]
q=[0]
graph=[0]
gdensity=[0]
hyperparameters=[1]
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[3] name=[Predictor] type=[PREDICTOR]
inla_parse_predictor ...
section=[Predictor]
dir=[predictor]
PRIOR->name=[loggamma]
hyperid=[53001|Predictor]
PRIOR->from_theta=[function (x) <<NEWLINE>>exp(x)]
PRIOR->to_theta = [function (x) <<NEWLINE>>log(x)]
PRIOR->PARAMETERS=[1, 1e-05]
initialise log_precision[12]
fixed=[1]
user.scale=[1]
n=[51748]
m=[0]
ndata=[51748]
compute=[1]
read offsets from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606746a43d] 19/51748 (idx,y) = (19, 0)
Aext=[(null)]
AextPrecision=[1e+08]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
parse section=[2] name=[INLA.Data1] type=[DATA]
inla_parse_data [section 1]...
tag=[INLA.Data1]
family=[POISSON]
likelihood=[POISSON]
file->name=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606e26f196]
file->name=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19603ebee759]
read n=[155244] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19606e26f196]
0/51748 (idx,a,y,d) = (0, 0.872178, 0, 1)
1/51748 (idx,a,y,d) = (1, 0.872178, 1, 1)
2/51748 (idx,a,y,d) = (2, 0.872178, 0, 1)
3/51748 (idx,a,y,d) = (3, 0.872178, 0, 1)
4/51748 (idx,a,y,d) = (4, 0.872178, 0, 1)
5/51748 (idx,a,y,d) = (5, 0.872178, 1, 1)
6/51748 (idx,a,y,d) = (6, 0.872178, 1, 1)
7/51748 (idx,a,y,d) = (7, 0.872178, 0, 1)
8/51748 (idx,a,y,d) = (8, 0.872178, 0, 1)
9/51748 (idx,a,y,d) = (9, 0.872178, 1, 1)
10/51748 (idx,a,y,d) = (10, 0.872178, 0, 1)
11/51748 (idx,a,y,d) = (11, 0.872178, 1, 1)
12/51748 (idx,a,y,d) = (12, 0.872178, 1, 1)
13/51748 (idx,a,y,d) = (13, 0.872178, 5, 1)
14/51748 (idx,a,y,d) = (14, 0.872178, 1, 1)
15/51748 (idx,a,y,d) = (15, 0.872178, 0, 1)
16/51748 (idx,a,y,d) = (16, 0.872178, 0, 1)
17/51748 (idx,a,y,d) = (17, 0.287131, 0, 1)
18/51748 (idx,a,y,d) = (18, 0.287131, 0, 1)
19/51748 (idx,a,y,d) = (19, 0.287131, 0, 1)
likelihood.variant=[0]
Link model [LOG]
Link order [-1]
Link variant [-1]
Link ntheta [0]
mix.use[0]
section=[4] name=[(Intercept)] type=[LINEAR]
inla_parse_linear...
section[(Intercept)]
dir=[fixed.effect00000001]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 0/51748 (idx,y) = (0, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 1/51748 (idx,y) = (1, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 2/51748 (idx,y) = (2, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 3/51748 (idx,y) = (3, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 4/51748 (idx,y) = (4, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 5/51748 (idx,y) = (5, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 6/51748 (idx,y) = (6, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 7/51748 (idx,y) = (7, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 8/51748 (idx,y) = (8, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 9/51748 (idx,y) = (9, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 10/51748 (idx,y) = (10, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 11/51748 (idx,y) = (11, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 12/51748 (idx,y) = (12, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 13/51748 (idx,y) = (13, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 14/51748 (idx,y) = (14, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 15/51748 (idx,y) = (15, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 16/51748 (idx,y) = (16, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file19604ec8d5c3] 19/51748 (idx,y) = (19, 1)
prior mean=[0]
prior precision=[0]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[5] name=[ICE_quant(-0.185,-0.0955] type=[LINEAR]
inla_parse_linear...
section[ICE_quant(-0.185,-0.0955]
dir=[fixed.effect00000002]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 17/51748 (idx,y) = (17, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 18/51748 (idx,y) = (18, 1)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file1960634a1d9d] 19/51748 (idx,y) = (19, 1)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[6] name=[ICE_quant(-0.0955,-0.00566] type=[LINEAR]
inla_parse_linear...
section[ICE_quant(-0.0955,-0.00566]
dir=[fixed.effect00000003]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196016de6158] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
section=[7] name=[ICE_quant(-0.00566,0.888] type=[LINEAR]
inla_parse_linear...
section[ICE_quant(-0.00566,0.888]
dir=[fixed.effect00000004]
file for covariates=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422]
read n=[103496] entries from file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422]
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 0/51748 (idx,y) = (0, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 1/51748 (idx,y) = (1, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 2/51748 (idx,y) = (2, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 3/51748 (idx,y) = (3, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 4/51748 (idx,y) = (4, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 5/51748 (idx,y) = (5, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 6/51748 (idx,y) = (6, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 7/51748 (idx,y) = (7, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 8/51748 (idx,y) = (8, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 9/51748 (idx,y) = (9, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 10/51748 (idx,y) = (10, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 11/51748 (idx,y) = (11, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 12/51748 (idx,y) = (12, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 13/51748 (idx,y) = (13, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 14/51748 (idx,y) = (14, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 15/51748 (idx,y) = (15, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 16/51748 (idx,y) = (16, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 17/51748 (idx,y) = (17, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 18/51748 (idx,y) = (18, 0)
file=[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/data.files/file196061c8e422] 19/51748 (idx,y) = (19, 0)
prior mean=[0]
prior precision=[0.001]
compute=[1]
output:
summary=[1]
return.marginals=[1]
nquantiles=[3] [ 0.025 0.5 0.975 ]
ncdf=[0] [ ]
Index table: number of entries[5], total length[51752]
tag start-index length
Predictor 0 51748
(Intercept) 51748 1
ICE_quant(-0.185,-0.0955 51749 1
ICE_quant(-0.0955,-0.00566 51750 1
ICE_quant(-0.00566,0.888 51751 1
parse section=[8] name=[INLA.Parameters] type=[INLA]
inla_parse_INLA...
section[INLA.Parameters]
lincomb.derived.only = [Yes]
lincomb.derived.correlation.matrix = [No]
global_node.factor = 2.000
global_node.degree = 2147483647
reordering = -1
Contents of ai_param 0x7fd51b504eb0
Optimiser: DEFAULT METHOD
Option for domin-BFGS: epsx = 0.005
Option for domin-BFGS: epsf = 1e-05 (rounding error)
Option for domin-BFGS: epsg = 0.005
Option for GSL-BFGS2: tol = 0.1
Option for GSL-BFGS2: step_size = 1
Option for GSL-BFGS2: epsx = 0.005
Option for GSL-BFGS2: epsf = 0.000353553
Option for GSL-BFGS2: epsg = 0.005
Restart: 0
Mode known: No
Gaussian approximation:
abserr_func = 0.0005
abserr_step = 0.0005
optpar_fp = 0
optpar_nr_step_factor = -0.1
Gaussian data: No
Strategy: Use a mean-skew corrected Gaussian by fitting a Skew-Normal
Fast mode: On
Use linear approximation to log(|Q +c|)? Yes
Method: Compute the derivative exact
Parameters for improved approximations
Number of points evaluate: 9
Step length to compute derivatives numerically: 0.000100002
Stencil to compute derivatives numerically: 5
Cutoff value to construct local neigborhood: 0.0001
Log calculations: On
Log calculated marginal for the hyperparameters: On
Integration strategy: Automatic (GRID for dim(theta)=1 and 2 and otherwise CCD)
f0 (CCD only): 1.100000
dz (GRID only): 0.750000
Adjust weights (GRID only): On
Difference in log-density limit (GRID only): 6.000000
Skip configurations with (presumed) small density (GRID only): On
Gradient is computed using Central difference with step-length 0.010000
Hessian is computed using Central difference with step-length 0.100000
Hessian matrix is forced to be a diagonal matrix? [No]
Compute effective number of parameters? [Yes]
Perform a Monte Carlo error-test? [No]
Interpolator [Auto]
CPO required diff in log-density [3]
Stupid search mode:
Status [On]
Max iter [1000]
Factor [1.05]
Numerical integration of hyperparameters:
Maximum number of function evaluations [100000]
Relative error ....................... [1e-05]
Absolute error ....................... [1e-06]
To stabilise the numerical optimisation:
Minimum value of the -Hessian [-inf]
CPO manual calculation[No]
Laplace-correction is Disabled.
inla_build: check for unused entries in[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/Model.ini]
inla_INLA...
Strategy = [DEFAULT]
Size is [51752]
Chose OpenMP-strategy [HUGE]
Chose density-strategy [LOW]
Size of graph=[51752] constraints=[0]
Found optimal reordering=[amdc] nnz(L)=[142317] and use_global_nodes(user)=[no]
None hyperparameters
Combine the densities with relative weights:
config 0/ 1=[] weight = 1.000 adjusted weight = 1.000 neff = 4.11
Done.
Expected effective number of parameters: 4.115(0.000), eqv.#replicates: 12575.467
DIC:
Mean of Deviance................. 84833.6
Deviance at Mean................. 84829.5
Effective number of parameters... 4.11462
DIC.............................. 84837.7
Store results in directory[/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/results.files]
Wall-clock time used on [/var/folders/_f/c7x33pyd15d2nc0t0rwwn9tw0000gn/T//RtmpGfeszz/file19603b172b78/Model.ini]
Preparations : 0.075 seconds
Approx inference: 61.456 seconds [3.2|0.0|0.0|95.1|1.7]%
Output : 3.648 seconds
---------------------------------
Total : 65.178 seconds
formula_only_covar3 <- y ~ 1 + ICE_quant + log_LII_quant + Lit_rate_demean + Perc_branca_demean
model_only_covar3 <- inla(formula_only_covar2, family="poisson", data=BYM_data_covar, E=E, verbose=TRUE, control.compute=list(dic=TRUE), control.predictor=list(compute=TRUE))
results_null <- data.frame(bymID = BYM_data$bymID, year=BYM_data$Year, smr_fit=model_yrlytrnd_2016fix$summary.fitted.values$mean, global_trnd=rep(model_yrlytrnd_2016fix$summary.fixed$mean[2], 51748), global_2016=rep(model_yrlytrnd_2016fix$summary.fixed$mean[3], 51748))
results_null$fix_2016 <- ifelse(results_null$fix_2016==16,1,0)
Error in `$<-.data.frame`(`*tmp*`, fix_2016, value = logical(0)) :
replacement has 0 rows, data has 51748
results_null_plot1 <- dplyr::select(results_null, bymID, year, smr_fit) %>% mutate(type="CT_specific")
results_null_plot2 <- results_null %>% dplyr::select(year, trendfit) %>% rename(smr_fit=trendfit) %>% mutate(type="global") %>% unique() %>% mutate(bymID=3055)
results_null_plot <- rbind(results_null_plot1, results_null_plot2)
library(ggplot2)
library(plotly)
package ‘plotly’ was built under R version 3.4.1
Attaching package: ‘plotly’
The following object is masked from ‘package:ggplot2’:
last_plot
The following object is masked from ‘package:raster’:
select
The following object is masked from ‘package:stats’:
filter
The following object is masked from ‘package:graphics’:
layout
p <- ggplot() + geom_line(data=results_null_plot, aes(x=year, y=smr_fit, group=bymID, color=type, linetype=type))
ggplotly(p)
We recommend that you use the dev version of ggplot2 with `ggplotly()`
Install it with: `devtools::install_github('hadley/ggplot2')`
plot_dfs <- lapply(1:17, function(x) filter(select(results_null, year, bymID, smr_fit), year==x))
breaks=c(-1, 0.5, 0.75, 1.0, 1.25, 1.50, 1.75, 2.0, 5.0, Inf)
labels=c("<0.5", "0.5-0.75",
"0.75-1.0", "1.0-1.25","1.25-1.50","1.5-1.75", "1.75-2.0",
"2.0-5.0", ">5.0")
plot_dfs <- lapply(plot_dfs, function(x) cbind(x, smr_cut=cut(x$smr_fit, breaks, labels)))
CT_shp_gg <- left_join(CT_shp_gg, select(BYM_data, bymID, CD_GEOCODI), by="CD_GEOCODI")
Column `CD_GEOCODI` joining factor and character vector, coercing into character vector
plot_dfs <- lapply(plot_dfs, function(x) left_join(CT_shp_gg, x, by="bymID"))
fit_plots <- vector("list", 17)
for (i in 1:length(plot_dfs)){
p <- plot_fort_maps2(plot_dfs[[i]], fill_str="smr_cut", legend_title = paste0("Standardized Mortality\nRatio - ", (2000+i)), plot_title = as.character(2000+i))
print(p)
fit_plots[[i]] <- p + theme(legend.position = "right", plot.title = element_text(size=22, hjust=0.5))
}
Loading required package: ggsn
Loading required package: broom
package ‘broom’ was built under R version 3.4.4
dir.create("examples")
'examples' already exists
setwd("examples")
The working directory was changed to /Users/Sudipta/Documents/Harvard - SM80/Thesis/Fortaleza_Hom_RGit/examples inside a notebook chunk. The working directory will be reset when the chunk is finished running. Use the knitr root.dir option in the setup chunk to change the working directory for notebook chunks.
# example 1: simple animated countdown from 10 to "GO!".
png(file="example%02d.png", height=200, width=300, units="mm", res=300)
for (i in 1:17){
print(fit_plots[[i]])
}
dev.off()
null device
1
# convert the .png files to one .gif file using ImageMagick.
# The system() function executes the command as if it was done
# in the terminal. the -delay flag sets the time between showing
# the frames, i.e. the speed of the animation.
system("convert -delay 80 *.png example_1.gif")
# to not leave the directory with the single jpeg files
# I remove them.
file.remove(list.files(pattern=".png"))
[1] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE
for (i in 1:51748){
u <- m[[51748+i]]
mat.marg[i,] <- inla.rmarginal(100000, u)
}
is.na() applied to non-(list or vector) of type 'NULL'no non-missing arguments to max; returning -Infno non-missing arguments to min; returning Infno non-missing arguments to max; returning -Infno non-missing arguments to min; returning Infno non-missing arguments to max; returning -InfError in seq.default(xmin, xmax, len = n) :
'from' must be a finite number